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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9114 and 9115 are separated by 158 nucleotides
9115 and 9116 are separated by 948 nucleotides
9116 and 9117 are separated by 322 nucleotides
9117 and 9118 are separated by 92 nucleotides
mRNA_746: 9114 - KOG0143 Iron/ascorbate family oxidoreductases, at 1,783,112 to 1,784,758
9114
mRNA_747: 9115 - K02737 PSMB5 20S proteasome subunit beta 5, at 1,784,917 to 1,786,577
9115
mRNA_748: 9116 - Hypothetical Protein, at 1,787,526 to 1,789,386
9116
mRNA_749: 9117 - Hypothetical Protein, at 1,789,709 to 1,790,560
9117
mRNA_750: 9118 - K12840 RBM17, SPF45 splicing factor 45, at 1,790,653 to 1,793,277
9118
Group
Condition
mRNA
_746
mRNA
_747
mRNA
_748
mRNA
_749
mRNA
_750
9114
9115
9116
9117
9118
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
N.D.
-0.6
N.D.
-0.9
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
N.D.
-0.6
N.D.
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.2
N.D.
-0.1
N.D.
-0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.2
N.D.
-0.1
N.D.
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.2
N.D.
-0.0
N.D.
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
N.D.
+0.6
N.D.
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
N.D.
-0.1
N.D.
+0.7
growth on oleic acid
YNB Oleic Acid
+0.3
N.D.
+0.4
N.D.
-0.5
growth on oleic acid
YNB Glucose
+0.3
N.D.
+0.4
N.D.
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
N.D.
-0.2
N.D.
+0.5
growth on ricinoleic acid
YNB Glucose
-0.1
N.D.
+0.7
N.D.
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
N.D.
+0.8
N.D.
-0.1
auxotrophy
YNB Glucose
+0.3
N.D.
+0.5
N.D.
-0.4
auxotrophy
Dropout Complete
+0.2
N.D.
+0.6
N.D.
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.0
N.D.
+0.6
N.D.
-0.2
growth on ypd
YPD
+0.6
N.D.
+0.1
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.3
N.D.
+0.8
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
N.D.
+0.3
N.D.
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
N.D.
+0.3
N.D.
+0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
N.D.
+0.4
N.D.
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.6
N.D.
+0.4
N.D.
+0.3
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