Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9117 and 9118 are separated by 92 nucleotides9118 and 9119 are separated by 117 nucleotides9119 and 9120 are separated by 180 nucleotides9120 and 9121 are separated by 751 nucleotides mRNA_749: 9117 - Hypothetical Protein, at 1,789,709 to 1,790,560 9117 mRNA_750: 9118 - K12840 RBM17, SPF45 splicing factor 45, at 1,790,653 to 1,793,277 9118 mRNA_751: 9119 - K19476 IST1 vacuolar protein sorting-associated protein IST1, at 1,793,395 to 1,794,980 9119 mRNA_752: 9120 - K12822 RBM25, S164 RNA-binding protein 25, at 1,795,161 to 1,797,625 9120 mRNA_753: 9121 - K02737 PSMB5 20S proteasome subunit beta 5, at 1,798,377 to 1,799,752 9121
Group Condition mRNA_749 mRNA_750 mRNA_751 mRNA_752 mRNA_753
9117 9118 9119 9120 9121
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 -0.6 -0.9 -1.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.5 -0.4 -0.8 -1.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.7 -0.3 -0.2 -1.4
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.9 -0.2 -0.3 +0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.3 -0.0 -0.3 -0.3
growth on oleic acid YNB Glucose N.D. -0.5 -0.1 -0.3 +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.3 +0.0 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.5 +0.5 -0.3 -1.3
growth on oleic acid YNB Oleic Acid N.D. -0.5 -0.0 -0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.4 -0.1 -0.4 +0.5
growth on ypd YPD N.D. -0.1 +0.2 +0.0 -0.4
auxotrophy YNB Glucose 75mM Arginine N.D. -0.3 -0.2 -0.3 +0.6
auxotrophy Dropout Complete N.D. -0.3 -0.5 -0.3 +1.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 -0.3 -0.0 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 -0.1 +0.5 +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 -0.3 -0.4 +1.2
auxotrophy YNB Glucose N.D. -0.4 -0.3 +0.0 +1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.4 +0.2 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.4 +0.4 +0.1 +0.1
growth on ricinoleic acid YNB Glucose N.D. -0.3 +0.1 +0.6 +0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.3 +0.5 +0.8 +0.8
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