Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9125 and 9126 are separated by 52 nucleotides9126 and 9127 are separated by 271 nucleotides9127 and 9128 are separated by 394 nucleotides9128 and 9129 are separated by 135 nucleotides mRNA_757: 9125 - K01493 comEB dCMP deaminase, at 1,804,262 to 1,807,266 9125 mRNA_758: 9126 - K20404 DEPDC5 DEP domain-containing protein 5, at 1,807,319 to 1,813,069 9126 mRNA_759: 9127 - K08486 STX1B_2_3 syntaxin 1B/2/3, at 1,813,341 to 1,815,378 9127 mRNA_760: 9128 - Interpro UDP-glucose-Glycoprotein Glucosyltransferase UDP-glucose-Glycoprotein Glucosyltransferase UDP-glucose-Glycoprotein Glucosyltransferase, at 1,815,773 to 1,818,752 9128 mRNA_761: 9129 - KOG2919 Guanine nucleotide-binding protein, at 1,818,888 to 1,820,583 9129
Group Condition mRNA_757 mRNA_758 mRNA_759 mRNA_760 mRNA_761
9125 9126 9127 9128 9129
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.1 N.D. -0.5 -0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.2 N.D. -0.2 -0.9
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.5 N.D. -0.4 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.0 N.D. +0.1 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.5 N.D. +0.3 +0.3
auxotrophy Dropout Complete -0.3 -0.5 N.D. +0.3 +0.3
growth on oleic acid YNB Oleic Acid +0.0 -0.3 N.D. +0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.6 N.D. +0.4 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.2 N.D. +0.3 +0.0
auxotrophy YNB Glucose -0.2 -0.3 N.D. +0.5 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.3 N.D. +0.4 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.1 N.D. +0.2 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.3 N.D. +0.4 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.1 N.D. -0.1 -0.0
growth on ricinoleic acid YNB Glucose +0.2 -0.2 N.D. +0.4 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.0 N.D. -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.4 -0.0 N.D. +0.0 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.1 N.D. +0.4 +0.0
growth on oleic acid YNB Glucose +0.1 -0.2 N.D. +0.5 +0.1
growth on ypd YPD +0.5 -0.3 N.D. +0.2 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.5 N.D. +0.4 +0.6
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