Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9130 and 9131 are separated by 405 nucleotides9131 and 9132 are separated by 163 nucleotides9132 and 9133 are separated by 535 nucleotides9133 and 9134 are separated by 224 nucleotides mRNA_762: 9130 - K11090 LA, SSB lupus La protein, at 1,820,887 to 1,822,873 9130 mRNA_763: 9131 - KOG4686 Predicted sugar transporter, at 1,823,279 to 1,825,136 9131 mRNA_764: 9132 - Hypothetical Protein, at 1,825,300 to 1,826,373 9132 mRNA_765: 9133 - K12849 PRPF38A pre-mRNA-splicing factor 38A, at 1,826,909 to 1,827,718 9133 mRNA_766: 9134 - K02899 RP-L27, MRPL27, rpmA large subunit ribosomal protein L27, at 1,827,943 to 1,828,724 9134
Group Condition mRNA_762 mRNA_763 mRNA_764 mRNA_765 mRNA_766
9130 9131 9132 9133 9134
facs on lipid accumulation Sorted No BODIPY Gate -2.1 -0.3 +0.2 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -2.5 -0.2 +0.4 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -1.6 -0.4 +0.4 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 -0.4 -0.1 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -1.5 +0.1 +0.2 N.D. N.D.
auxotrophy Dropout Complete -1.1 +0.0 +0.2 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 +0.3 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.0 +0.4 +0.1 N.D. N.D.
auxotrophy YNB Glucose -0.9 +0.1 +0.4 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.4 +0.4 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.2 +0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.7 +0.4 +0.5 N.D. N.D.
growth on oleic acid YNB Glucose -0.0 +0.0 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.4 -0.1 N.D. N.D.
growth on ypd YPD -0.3 +0.5 +0.3 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.0 +0.5 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.1 +0.5 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 +0.1 -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 +0.2 +0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.6 +0.3 +0.4 N.D. N.D.
growth on oleic acid YNB Oleic Acid +1.3 +0.0 +0.1 N.D. N.D.
remove
mRNA_762
plot
remove
mRNA_763
plot
remove
mRNA_764
remove
mRNA_765
plot
remove
mRNA_766
plot