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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9134 and 9135 are separated by 166 nucleotides
9135 and 9136 are separated by 241 nucleotides
9136 and 9137 overlap by 2 nucleotides
9137 and 9138 are separated by 352 nucleotides
mRNA_766: 9134 - K02899 RP-L27, MRPL27, rpmA large subunit ribosomal protein L27, at 1,827,943 to 1,828,724
9134
mRNA_767: 9135 - K01182 IMA, malL oligo-1,6-glucosidase, at 1,828,891 to 1,831,051
9135
mRNA_768: 9136 - Hypothetical Protein, at 1,831,293 to 1,832,129
9136
mRNA_769: 9137 - K08141 MAL MFS transporter, SP family, general alpha glucoside-H+ symporter, at 1,832,128 to 1,834,944
9137
mRNA_770: 9138 - K10765 ALKBH1 alkylated DNA repair protein alkB homolog 1, at 1,835,297 to 1,836,834
9138
Group
Condition
mRNA
_766
mRNA
_767
mRNA
_768
mRNA
_769
mRNA
_770
9134
9135
9136
9137
9138
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.0
-0.1
-0.1
-0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.4
-0.2
-0.0
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.3
-0.0
+0.2
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.2
+0.0
-0.1
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.1
+0.0
+0.1
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.3
+0.0
+0.3
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.0
-0.0
+0.2
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.3
-0.1
+0.4
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
-0.3
+0.0
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.2
-0.3
-0.0
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.1
-0.1
+0.1
-0.1
growth on oleic acid
YNB Glucose
N.D.
+0.0
+0.1
+0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.3
-0.0
+0.4
+0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.0
+0.0
+0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
-0.1
+0.3
+0.0
growth on oleic acid
YNB Oleic Acid
N.D.
+0.2
-0.0
+0.2
-0.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.0
-0.0
+0.2
+0.2
auxotrophy
Dropout Complete
N.D.
-0.0
-0.0
+0.2
+0.2
growth on ypd
YPD
N.D.
+0.2
-0.0
+0.1
+0.2
auxotrophy
YNB Glucose
N.D.
+0.2
+0.0
+0.1
+0.3
growth on ricinoleic acid
YNB Glucose
N.D.
+0.2
-0.1
+0.0
+0.6
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