Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9138 and 9139 are separated by 409 nucleotides9139 and 9140 overlap by 13 nucleotides9140 and 9141 are separated by 460 nucleotides9141 and 9142 are separated by 1023 nucleotides mRNA_770: 9138 - K10765 ALKBH1 alkylated DNA repair protein alkB homolog 1, at 1,835,297 to 1,836,834 9138 mRNA_771: 9139 - KOG0254 Predicted transporter (major facilitator superfamily), at 1,837,244 to 1,837,694 9139 mRNA_772: 9140 - Hypothetical Protein, at 1,837,682 to 1,837,975 9140 mRNA_773: 9141 - BLAST alpha,alpha-trehalase [Microbotryum lychnidis-dioicae..., at 1,838,436 to 1,839,062 9141 mRNA_774: 9142 - K17457 PPP1R12C, MBS85 protein phosphatase 1 regulatory subunit 12C, at 1,840,086 to 1,841,880 9142
Group Condition mRNA_770 mRNA_771 mRNA_772 mRNA_773 mRNA_774
9138 9139 9140 9141 9142
facs on lipid accumulation Sorted High BODIPY Gate -0.6 N.D. -1.3 +0.1 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 N.D. -0.4 -0.3 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. -0.9 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. -0.5 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. -0.7 -0.2 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. -0.3 +0.3 -1.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. +0.1 +0.2 -1.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.6 -0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. -0.1 -0.2 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 N.D. -0.3 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 N.D. -0.2 +0.1 -0.2
growth on ypd YPD +0.2 N.D. -0.4 +0.0 -0.5
growth on ricinoleic acid YNB Glucose +0.6 N.D. -0.4 +0.3 -1.0
growth on oleic acid YNB Glucose -0.2 N.D. +0.2 +0.3 -0.8
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. -0.5 +0.1 +0.2
growth on oleic acid YNB Oleic Acid -0.3 N.D. +0.4 +0.2 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. -0.3 +0.3 -0.0
auxotrophy Dropout Complete +0.2 N.D. -0.3 +0.3 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. -0.1 +0.2 +0.4
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. +0.3 +0.1 +0.4
auxotrophy YNB Glucose +0.3 N.D. -0.0 +0.2 +0.6
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