Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9142 and 9143 are separated by 371 nucleotides9143 and 9144 are separated by 233 nucleotides9144 and 9145 are separated by 1094 nucleotides9145 and 9146 are separated by 292 nucleotides mRNA_774: 9142 - K17457 PPP1R12C, MBS85 protein phosphatase 1 regulatory subunit 12C, at 1,840,086 to 1,841,880 9142 mRNA_775: 9143 - Hypothetical Protein, at 1,842,252 to 1,843,593 9143 mRNA_776: 9144 - BLAST NADH-ubiquinone oxidoreductase kD subunit [Pseudo..., at 1,843,827 to 1,844,410 9144 mRNA_777: 9145 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 1,845,505 to 1,850,431 9145 mRNA_778: 9146 - K14548 UTP4, CIRH1A U3 small nucleolar RNA-associated protein 4, at 1,850,724 to 1,853,969 9146
Group Condition mRNA_774 mRNA_775 mRNA_776 mRNA_777 mRNA_778
9142 9143 9144 9145 9146
growth on ricinoleic acid YNB Glucose -1.0 +0.0 N.D. +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.2 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 N.D. -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.7 +0.3 N.D. -0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 +0.9 N.D. -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.0 N.D. -0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.0 N.D. -0.2 N.D.
growth on oleic acid YNB Oleic Acid -0.4 +0.3 N.D. -0.1 N.D.
growth on oleic acid YNB Glucose -0.8 +0.7 N.D. -0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 +0.8 N.D. +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.4 -0.2 N.D. -0.2 N.D.
auxotrophy Dropout Complete +0.0 +0.1 N.D. -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.0 N.D. -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.2 N.D. -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.1 N.D. -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.1 N.D. +0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.2 N.D. -0.2 N.D.
auxotrophy YNB Glucose +0.6 -0.1 N.D. +0.0 N.D.
growth on ypd YPD -0.5 +0.8 N.D. +0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.4 N.D. +0.1 N.D.
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