Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9149 and 9150 are separated by 551 nucleotides9150 and 9151 are separated by 1152 nucleotides9151 and 9152 are separated by 315 nucleotides9152 and 9153 are separated by 513 nucleotides mRNA_781: 9149 - K02910 RP-L31e, RPL31 large subunit ribosomal protein L31e, at 1,860,741 to 1,861,371 9149 mRNA_782: 9150 - K02917 RP-L35Ae, RPL35A large subunit ribosomal protein L35Ae, at 1,861,923 to 1,862,958 9150 mRNA_783: 9151 - HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481, at 1,864,111 to 1,866,017 9151 mRNA_784: 9152 - HMMPfam-Uncharacterized alpha/beta hydrolase domain (DUF2235)-PF09994, at 1,866,333 to 1,867,961 9152 mRNA_785: 9153 - K07305 msrB peptide-methionine (R)-S-oxide reductase, at 1,868,475 to 1,869,401 9153
Group Condition mRNA_781 mRNA_782 mRNA_783 mRNA_784 mRNA_785
9149 9150 9151 9152 9153
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -1.0 -0.5 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.8 -0.3 +0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.6 -0.1 +0.2
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.2 +0.0 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.4 +0.4 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.4 +0.4 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.0 +0.0 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.3 +0.7 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.5 +0.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.1 -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.2 -0.2 -0.0
growth on oleic acid YNB Glucose N.D. N.D. -0.3 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.2 +0.4 -0.0
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.4 -0.1 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.4 +0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.3 -0.1 +0.1
auxotrophy Dropout Complete N.D. N.D. +0.4 +0.2 -0.2
growth on ypd YPD N.D. N.D. +0.2 +0.4 -0.2
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.4 +0.1 +0.0
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.4 +0.3 -0.1
auxotrophy YNB Glucose N.D. N.D. +0.4 +0.4 +0.0
remove
mRNA_781
plot
remove
mRNA_782
plot
remove
mRNA_783
remove
mRNA_784
plot
remove
mRNA_785
plot