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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9152 and 9153 are separated by 513 nucleotides
9153 and 9154 are separated by 115 nucleotides
9154 and 9155 are separated by 237 nucleotides
9155 and 9156 are separated by 285 nucleotides
mRNA_784: 9152 - HMMPfam-Uncharacterized alpha/beta hydrolase domain (DUF2235)-PF09994, at 1,866,333 to 1,867,961
9152
mRNA_785: 9153 - K07305 msrB peptide-methionine (R)-S-oxide reductase, at 1,868,475 to 1,869,401
9153
mRNA_786: 9154 - Hypothetical Protein, at 1,869,517 to 1,870,125
9154
mRNA_787: 9155 - K17804 TIM44 mitochondrial import inner membrane translocase subunit TIM44, at 1,870,363 to 1,872,119
9155
mRNA_788: 9156 - Hypothetical Protein, at 1,872,405 to 1,873,287
9156
Group
Condition
mRNA
_784
mRNA
_785
mRNA
_786
mRNA
_787
mRNA
_788
9152
9153
9154
9155
9156
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
+0.1
-0.4
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.0
-0.4
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.0
-0.0
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
-0.0
N.D.
N.D.
auxotrophy
Dropout Complete
+0.2
-0.2
-0.2
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.2
+0.0
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.1
-0.1
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.1
-0.2
N.D.
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.2
-0.2
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
+0.0
-0.3
+0.2
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-0.1
-0.2
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
-0.2
-0.0
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
+0.1
+0.0
+0.1
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
-0.3
+0.2
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.0
+0.4
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
-0.0
+0.1
N.D.
N.D.
auxotrophy
YNB Glucose
+0.4
+0.0
+0.2
N.D.
N.D.
growth on oleic acid
YNB Glucose
+0.2
+0.1
+0.3
N.D.
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.7
-0.5
+0.5
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.2
+0.3
N.D.
N.D.
growth on ypd
YPD
+0.4
-0.2
+0.6
N.D.
N.D.
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