Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9157 and 9158 are separated by 573 nucleotides9158 and 9159 are separated by 203 nucleotides9159 and 9160 are separated by 676 nucleotides9160 and 9161 are separated by 253 nucleotides mRNA_789: 9157 - K14459 HEX hexosaminidase, at 1,873,668 to 1,877,392 9157 mRNA_790: 9158 - HMMPfam-C2 domain-PF00168,ProSiteProfiles-C2 domain profile.-PS50004,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562, at 1,877,966 to 1,880,180 9158 mRNA_791: 9159 - HMMPfam-Svf1-like-PF08622,SUPERFAMILY--SSF159245, at 1,880,384 to 1,881,933 9159 mRNA_792: 9160 - SUPERFAMILY--SSF52047, at 1,882,610 to 1,885,727 9160 mRNA_793: 9161 - KOG0374 Serine/threonine specific protein phosphatase PP1, catalytic subunit, at 1,885,981 to 1,887,715 9161
Group Condition mRNA_789 mRNA_790 mRNA_791 mRNA_792 mRNA_793
9157 9158 9159 9160 9161
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.8 N.D. -0.3 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.7 N.D. -0.2 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.1 N.D. -0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.0 N.D. -0.1 -0.2
auxotrophy Dropout Complete -0.4 +0.2 N.D. -0.0 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.3 N.D. -0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 N.D. +0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.0 N.D. +0.2 -0.1
growth on oleic acid YNB Glucose -0.3 +0.0 N.D. -0.1 +0.4
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.4 N.D. -0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 N.D. +0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.2 N.D. +0.1 +0.3
growth on oleic acid YNB Oleic Acid -0.4 +0.3 N.D. -0.2 +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.2 N.D. -0.1 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.2 N.D. +0.4 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.2 N.D. -0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.2 N.D. -0.0 +0.2
auxotrophy YNB Glucose -0.1 +0.1 N.D. +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.0 N.D. +0.2 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.0 N.D. +0.3 +0.3
growth on ypd YPD -0.2 +0.5 N.D. +0.4 +0.3
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