Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9158 and 9159 are separated by 203 nucleotides9159 and 9160 are separated by 676 nucleotides9160 and 9161 are separated by 253 nucleotides9161 and 9162 are separated by 155 nucleotides mRNA_790: 9158 - HMMPfam-C2 domain-PF00168,ProSiteProfiles-C2 domain profile.-PS50004,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562, at 1,877,966 to 1,880,180 9158 mRNA_791: 9159 - HMMPfam-Svf1-like-PF08622,SUPERFAMILY--SSF159245, at 1,880,384 to 1,881,933 9159 mRNA_792: 9160 - SUPERFAMILY--SSF52047, at 1,882,610 to 1,885,727 9160 mRNA_793: 9161 - KOG0374 Serine/threonine specific protein phosphatase PP1, catalytic subunit, at 1,885,981 to 1,887,715 9161 mRNA_794: 9162 - K14834 NOC3 nucleolar complex protein 3, at 1,887,871 to 1,891,135 9162
Group Condition mRNA_790 mRNA_791 mRNA_792 mRNA_793 mRNA_794
9158 9159 9160 9161 9162
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 N.D. -0.3 -0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.7 N.D. -0.2 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. -0.3 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 N.D. -0.1 -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. +0.0 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. -0.1 -0.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. +0.4 -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. +0.1 -0.1 N.D.
auxotrophy Dropout Complete +0.2 N.D. -0.0 -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. -0.1 +0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 N.D. +0.2 -0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.2 N.D. +0.1 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. -0.0 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. -0.0 +0.2 N.D.
growth on oleic acid YNB Glucose +0.0 N.D. -0.1 +0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.4 N.D. -0.1 +0.0 N.D.
auxotrophy YNB Glucose +0.1 N.D. +0.1 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 N.D. +0.2 +0.3 N.D.
growth on oleic acid YNB Oleic Acid +0.3 N.D. -0.2 +0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 N.D. +0.3 +0.3 N.D.
growth on ypd YPD +0.5 N.D. +0.4 +0.3 N.D.
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