Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9160 and 9161 are separated by 253 nucleotides
9161 and 9162 are separated by 155 nucleotides
9162 and 9163 are separated by 104 nucleotides
9163 and 9164 are separated by 385 nucleotides
mRNA_792: 9160 - SUPERFAMILY--SSF52047, at 1,882,610 to 1,885,727
9160
mRNA_793: 9161 - KOG0374 Serine/threonine specific protein phosphatase PP1, catalytic subunit, at 1,885,981 to 1,887,715
9161
mRNA_794: 9162 - K14834 NOC3 nucleolar complex protein 3, at 1,887,871 to 1,891,135
9162
mRNA_795: 9163 - KOG0137 Very-long-chain acyl-CoA dehydrogenase, at 1,891,240 to 1,893,546
9163
mRNA_796: 9164 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1,893,932 to 1,897,116
9164
Group
Condition
mRNA
_792
mRNA
_793
mRNA
_794
mRNA
_795
mRNA
_796
9160
9161
9162
9163
9164
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.3
N.D.
-0.6
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.0
N.D.
-0.4
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.1
N.D.
-0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.1
N.D.
-0.2
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
-0.3
N.D.
-0.1
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.3
N.D.
+0.2
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.1
N.D.
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.2
N.D.
-0.2
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.3
N.D.
+0.4
-0.2
auxotrophy
Dropout Complete
-0.0
-0.2
N.D.
+0.0
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.0
N.D.
+0.2
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.2
N.D.
-0.2
+0.1
growth on oleic acid
YNB Oleic Acid
-0.2
+0.4
N.D.
+0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
N.D.
+0.4
+0.0
auxotrophy
YNB Glucose
+0.1
+0.1
N.D.
+0.2
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+0.3
N.D.
-0.1
+0.1
growth on ricinoleic acid
YNB Glucose
+0.1
+0.3
N.D.
-0.2
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.1
N.D.
+0.6
+0.1
growth on ypd
YPD
+0.4
+0.3
N.D.
+0.1
-0.0
growth on oleic acid
YNB Glucose
-0.1
+0.4
N.D.
-0.1
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.3
N.D.
+0.0
+0.2
remove
mRNA_792
plot
remove
mRNA_793
plot
remove
mRNA_794
remove
mRNA_795
plot
remove
mRNA_796
plot