Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9161 and 9162 are separated by 155 nucleotides9162 and 9163 are separated by 104 nucleotides9163 and 9164 are separated by 385 nucleotides9164 and 9165 are separated by 614 nucleotides mRNA_793: 9161 - KOG0374 Serine/threonine specific protein phosphatase PP1, catalytic subunit, at 1,885,981 to 1,887,715 9161 mRNA_794: 9162 - K14834 NOC3 nucleolar complex protein 3, at 1,887,871 to 1,891,135 9162 mRNA_795: 9163 - KOG0137 Very-long-chain acyl-CoA dehydrogenase, at 1,891,240 to 1,893,546 9163 mRNA_796: 9164 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1,893,932 to 1,897,116 9164 mRNA_797: 9165 - K02265 COX5B cytochrome c oxidase subunit 5b, at 1,897,731 to 1,898,518 9165
Group Condition mRNA_793 mRNA_794 mRNA_795 mRNA_796 mRNA_797
9161 9162 9163 9164 9165
facs on lipid accumulation Sorted High BODIPY Gate +0.0 N.D. -0.4 -0.4 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.3 N.D. +0.2 -0.0 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. -0.2 +0.3 -0.7
auxotrophy Dropout Complete -0.2 N.D. +0.0 +0.1 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. -0.1 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. -0.6 -0.2 +0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 N.D. -0.1 -0.4 +0.3
auxotrophy YNB Glucose +0.1 N.D. +0.2 +0.0 -0.8
auxotrophy YNB Glucose 75mM Methionine +0.0 N.D. +0.2 -0.2 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. -0.2 -0.5 +0.6
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. +0.6 +0.1 -0.6
growth on oleic acid YNB Oleic Acid +0.4 N.D. +0.0 +0.1 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. +0.4 -0.2 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. -0.3 -0.1 +0.5
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.4 +0.0 +0.1
growth on ypd YPD +0.3 N.D. +0.1 -0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. -0.2 +0.1 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. -0.1 +0.1 +0.5
growth on ricinoleic acid YNB Glucose +0.3 N.D. -0.2 +0.3 +0.5
growth on oleic acid YNB Glucose +0.4 N.D. -0.1 +0.5 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 N.D. +0.0 +0.2 +0.7
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