Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9162 and 9163 are separated by 104 nucleotides9163 and 9164 are separated by 385 nucleotides9164 and 9165 are separated by 614 nucleotides9165 and 9166 are separated by 437 nucleotides mRNA_794: 9162 - K14834 NOC3 nucleolar complex protein 3, at 1,887,871 to 1,891,135 9162 mRNA_795: 9163 - KOG0137 Very-long-chain acyl-CoA dehydrogenase, at 1,891,240 to 1,893,546 9163 mRNA_796: 9164 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1,893,932 to 1,897,116 9164 mRNA_797: 9165 - K02265 COX5B cytochrome c oxidase subunit 5b, at 1,897,731 to 1,898,518 9165 mRNA_798: 9166 - K15376 GPHN gephyrin, at 1,898,956 to 1,901,377 9166
Group Condition mRNA_794 mRNA_795 mRNA_796 mRNA_797 mRNA_798
9162 9163 9164 9165 9166
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 -0.4 -0.5 +0.1
auxotrophy Dropout Complete N.D. +0.0 +0.1 -0.7 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 -0.0 -0.7 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.2 +0.3 -0.7 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 -0.2 -0.2 +0.1
auxotrophy YNB Glucose N.D. +0.2 +0.0 -0.8 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.6 -0.2 +0.5 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 -0.2 -0.5 +0.3
growth on oleic acid YNB Oleic Acid N.D. +0.0 +0.1 -0.4 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 -0.5 +0.6 -0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.6 +0.1 -0.6 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 -0.4 +0.3 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 +0.1 +0.5 -0.3
growth on ypd YPD N.D. +0.1 -0.0 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.3 -0.1 +0.5 +0.3
growth on ricinoleic acid YNB Glucose N.D. -0.2 +0.3 +0.5 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.4 +0.0 +0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 +0.1 +0.5 +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.4 -0.2 +0.3 +0.2
growth on oleic acid YNB Glucose N.D. -0.1 +0.5 +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.0 +0.2 +0.7 +0.0
remove
mRNA_794
plot
remove
mRNA_795
plot
remove
mRNA_796
remove
mRNA_797
plot
remove
mRNA_798
plot