Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9170 and 9171 are separated by 390 nucleotides9171 and 9172 are separated by 1510 nucleotides9172 and 9173 are separated by 434 nucleotides9173 and 9174 are separated by 273 nucleotides mRNA_802: 9170 - SUPERFAMILY--SSF52047, at 1,907,312 to 1,908,570 9170 mRNA_803: 9171 - HMMPfam-Velvet factor-PF11754, at 1,908,961 to 1,910,410 9171 mRNA_804: 9172 - K17794 TIM23 mitochondrial import inner membrane translocase subunit TIM23, at 1,911,921 to 1,912,961 9172 mRNA_805: 9173 - K09191 GTF3A general transcription factor IIIA, at 1,913,396 to 1,915,422 9173 mRNA_806: 9174 - KOG1515 Arylacetamide deacetylase, at 1,915,696 to 1,917,845 9174
Group Condition mRNA_802 mRNA_803 mRNA_804 mRNA_805 mRNA_806
9170 9171 9172 9173 9174
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.9 N.D. N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate -1.5 +0.0 N.D. N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate -1.0 +0.4 N.D. N.D. -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 -0.9 N.D. N.D. -0.0
auxotrophy Dropout Complete +0.6 -1.1 N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 +0.0 N.D. N.D. +0.3
ypd buoyancy 40 hrs High Buoyancy +0.5 +0.1 N.D. N.D. -0.6
growth on oleic acid YNB Oleic Acid +0.0 -0.1 N.D. N.D. +0.2
growth on ricinoleic acid YNB Glucose +0.3 -0.1 N.D. N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -0.4 N.D. N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.2 N.D. N.D. -0.2
auxotrophy YNB Glucose +0.3 -0.2 N.D. N.D. +0.3
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.1 N.D. N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.7 +0.1 N.D. N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.2 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.8 N.D. N.D. +0.2
growth on oleic acid YNB Glucose +0.3 +0.1 N.D. N.D. +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +1.4 N.D. N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.3 N.D. N.D. +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +1.0 N.D. N.D. +0.3
growth on ypd YPD +1.6 -0.3 N.D. N.D. +0.3
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