Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9174 and 9175 are separated by 608 nucleotides9175 and 9176 are separated by 405 nucleotides9176 and 9177 are separated by 663 nucleotides9177 and 9178 are separated by 622 nucleotides mRNA_806: 9174 - KOG1515 Arylacetamide deacetylase, at 1,915,696 to 1,917,845 9174 mRNA_807: 9175 - Hypothetical Protein, at 1,918,454 to 1,920,655 9175 mRNA_808: 9176 - K00053 ilvC ketol-acid reductoisomerase, at 1,921,061 to 1,923,091 9176 mRNA_809: 9177 - HMMPfam-Acetohydroxy acid isomeroreductase, catalytic domain-PF01450,SUPERFAMILY--SSF48179, at 1,923,755 to 1,924,873 9177 mRNA_810: 9178 - HMMPfam-Acetohydroxy acid isomeroreductase, catalytic domain-PF01450,SUPERFAMILY--SSF48179, at 1,925,496 to 1,926,614 9178
Group Condition mRNA_806 mRNA_807 mRNA_808 mRNA_809 mRNA_810
9174 9175 9176 9177 9178
ypd buoyancy 40 hrs High Buoyancy -0.6 -0.1 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.6 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.1 -0.3 N.D. N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.4 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.6 N.D. N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.2 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.3 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.2 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.2 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.0 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.2 N.D. N.D. N.D.
growth on oleic acid YNB Glucose +0.3 -0.2 N.D. N.D. N.D.
auxotrophy Dropout Complete +0.2 -0.0 N.D. N.D. N.D.
auxotrophy YNB Glucose +0.3 -0.1 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.2 +0.0 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 -0.3 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.0 N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.5 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 N.D. N.D. N.D.
growth on ypd YPD +0.3 +0.2 N.D. N.D. N.D.
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