Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9177 and 9178 are separated by 622 nucleotides9178 and 9179 are separated by 2499 nucleotides9179 and 9180 are separated by 472 nucleotides9180 and 9181 are separated by 261 nucleotides mRNA_809: 9177 - HMMPfam-Acetohydroxy acid isomeroreductase, catalytic domain-PF01450,SUPERFAMILY--SSF48179, at 1,923,755 to 1,924,873 9177 mRNA_810: 9178 - HMMPfam-Acetohydroxy acid isomeroreductase, catalytic domain-PF01450,SUPERFAMILY--SSF48179, at 1,925,496 to 1,926,614 9178 mRNA_811: 9179 - Interpro Glycosyl-transferase for dystroglycan, at 1,929,114 to 1,931,965 9179 mRNA_812: 9180 - K00474 TMLHE trimethyllysine dioxygenase, at 1,932,438 to 1,934,306 9180 mRNA_813: 9181 - KOG1515 Arylacetamide deacetylase, at 1,934,568 to 1,937,031 9181
Group Condition mRNA_809 mRNA_810 mRNA_811 mRNA_812 mRNA_813
9177 9178 9179 9180 9181
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -1.8 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -1.0 N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.7 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.2 N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.6 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.2 N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.2 N.D. +0.1
growth on ypd YPD N.D. N.D. -0.1 N.D. +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.0 N.D. -0.1
auxotrophy YNB Glucose N.D. N.D. -0.1 N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.3 N.D. -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.6 N.D. -0.2
auxotrophy Dropout Complete N.D. N.D. +0.0 N.D. +0.4
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.1 N.D. +0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.7 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.4 N.D. +0.2
growth on oleic acid YNB Glucose N.D. N.D. +0.5 N.D. +0.2
growth on ricinoleic acid YNB Glucose N.D. N.D. +1.1 N.D. -0.1
growth on oleic acid YNB Oleic Acid N.D. N.D. +1.2 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +2.0 N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +2.2 N.D. +0.3
remove
mRNA_809
plot		 remove
mRNA_810
plot		 remove
mRNA_811		 remove
mRNA_812
plot		 remove
mRNA_813
plot