Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9178 and 9179 are separated by 2499 nucleotides9179 and 9180 are separated by 472 nucleotides9180 and 9181 are separated by 261 nucleotides9181 and 9182 are separated by 522 nucleotides mRNA_810: 9178 - HMMPfam-Acetohydroxy acid isomeroreductase, catalytic domain-PF01450,SUPERFAMILY--SSF48179, at 1,925,496 to 1,926,614 9178 mRNA_811: 9179 - Interpro Glycosyl-transferase for dystroglycan, at 1,929,114 to 1,931,965 9179 mRNA_812: 9180 - K00474 TMLHE trimethyllysine dioxygenase, at 1,932,438 to 1,934,306 9180 mRNA_813: 9181 - KOG1515 Arylacetamide deacetylase, at 1,934,568 to 1,937,031 9181 mRNA_814: 9182 - K15075 MET18, MMS19 DNA repair/transcription protein MET18/MMS19, at 1,937,554 to 1,941,739 9182
Group Condition mRNA_810 mRNA_811 mRNA_812 mRNA_813 mRNA_814
9178 9179 9180 9181 9182
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.8 N.D. +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -1.0 N.D. -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.7 N.D. -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 N.D. -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.6 N.D. +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.2 N.D. +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 N.D. +0.1 N.D.
growth on ypd YPD N.D. -0.1 N.D. +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.0 N.D. -0.1 N.D.
auxotrophy YNB Glucose N.D. -0.1 N.D. +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.3 N.D. -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.6 N.D. -0.2 N.D.
auxotrophy Dropout Complete N.D. +0.0 N.D. +0.4 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 N.D. +0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.7 N.D. -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.4 N.D. +0.2 N.D.
growth on oleic acid YNB Glucose N.D. +0.5 N.D. +0.2 N.D.
growth on ricinoleic acid YNB Glucose N.D. +1.1 N.D. -0.1 N.D.
growth on oleic acid YNB Oleic Acid N.D. +1.2 N.D. +0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +2.0 N.D. -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +2.2 N.D. +0.3 N.D.
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