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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9191 and 9192 are separated by 373 nucleotides
9192 and 9193 are separated by 469 nucleotides
9193 and 9194 are separated by 239 nucleotides
9194 and 9195 are separated by 76 nucleotides
mRNA_823: 9191 - HMMPfam-Fungal domain of unknown function (DUF1712)-PF08217, at 1,971,584 to 1,974,293
9191
mRNA_824: 9192 - Hypothetical Protein, at 1,974,667 to 1,975,574
9192
mRNA_825: 9193 - HMMPfam-Modifier of rudimentary (Mod(r)) protein-PF07200,ProSiteProfiles-VPS37 C-terminal domain profile.-PS51314,SUPERFAMILY--SSF140111, at 1,976,044 to 1,976,786
9193
mRNA_826: 9194 - HMMPfam-T-complex protein 11-PF05794, at 1,977,026 to 1,979,152
9194
mRNA_827: 9195 - Hypothetical Protein, at 1,979,229 to 1,980,332
9195
Group
Condition
mRNA
_823
mRNA
_824
mRNA
_825
mRNA
_826
mRNA
_827
9191
9192
9193
9194
9195
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.1
-4.1
-0.6
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.6
-3.7
+0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
-0.1
-4.1
-0.3
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
-0.9
-2.1
-0.4
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.2
-4.1
-0.3
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
+0.4
-4.0
-0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
+0.4
-3.1
+0.0
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.2
-2.7
-0.1
-0.2
auxotrophy
YNB Glucose
+0.3
-0.6
-2.0
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.7
+0.2
-2.5
-0.2
-0.4
growth on ricinoleic acid
YNB Glucose
+0.0
+0.6
-2.2
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.7
-0.1
-1.7
-0.1
-0.1
auxotrophy
Dropout Complete
+0.2
-0.5
-0.7
+0.2
-0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.5
-0.6
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.2
-1.2
+0.3
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.2
+0.1
+0.0
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.1
+0.4
-0.2
-0.3
growth on oleic acid
YNB Oleic Acid
-0.2
+0.2
-0.3
+0.2
+0.1
growth on ypd
YPD
-0.4
+0.7
+0.0
+0.2
-0.1
growth on oleic acid
YNB Glucose
+0.0
-0.1
+0.3
+0.3
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.0
+0.6
-0.8
+0.0
-0.3
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