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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9195 and 9196 are separated by 525 nucleotides
9196 and 9197 are separated by 689 nucleotides
9197 and 9198 are separated by 432 nucleotides
9198 and 9199 are separated by 389 nucleotides
mRNA_827: 9195 - Hypothetical Protein, at 1,979,229 to 1,980,332
9195
mRNA_828: 9196 - HMMPfam-Protein of unknown function (DUF2420)-PF10336, at 1,980,858 to 1,983,509
9196
mRNA_829: 9197 - HMMPfam-Spc7 kinetochore protein-PF08317,SMART-Spc7 kinetochore protein-SM00787, at 1,984,199 to 1,988,562
9197
mRNA_830: 9198 - K00413 CYC1, CYT1, petC ubiquinol-cytochrome c reductase cytochrome c1 subunit, at 1,988,995 to 1,990,549
9198
mRNA_831: 9199 - K12366 ELMO1, CED12 engulfment and cell motility protein 1, at 1,990,939 to 1,993,710
9199
Group
Condition
mRNA
_827
mRNA
_828
mRNA
_829
mRNA
_830
mRNA
_831
9195
9196
9197
9198
9199
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
N.D.
N.D.
N.D.
-0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.3
N.D.
N.D.
N.D.
-0.6
auxotrophy
Dropout Complete
-0.5
N.D.
N.D.
N.D.
-0.4
growth on ricinoleic acid
YNB Glucose
-0.1
N.D.
N.D.
N.D.
-0.6
growth on oleic acid
YNB Glucose
-0.0
N.D.
N.D.
N.D.
-0.6
auxotrophy
YNB Glucose
-0.1
N.D.
N.D.
N.D.
-0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.1
N.D.
N.D.
N.D.
-0.4
growth on ypd
YPD
-0.1
N.D.
N.D.
N.D.
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.3
N.D.
N.D.
N.D.
-0.1
growth on oleic acid
YNB Oleic Acid
+0.1
N.D.
N.D.
N.D.
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
N.D.
N.D.
N.D.
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
N.D.
N.D.
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
N.D.
N.D.
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
N.D.
N.D.
N.D.
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
N.D.
N.D.
N.D.
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
N.D.
N.D.
N.D.
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
N.D.
N.D.
N.D.
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
N.D.
N.D.
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
N.D.
N.D.
N.D.
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
N.D.
N.D.
N.D.
+0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
N.D.
N.D.
N.D.
+0.2
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