Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9201 and 9202 are separated by 314 nucleotides9202 and 9203 are separated by 180 nucleotides9203 and 9204 are separated by 292 nucleotides9204 and 9205 are separated by 300 nucleotides mRNA_833: 9201 - HMMPfam-Homeobox domain-PF00046,ProSiteProfiles-'Homeobox' domain profile.-PS50071,SMART-Homeodomain-SM00389,SUPERFAMILY--SSF46689, at 1,996,035 to 1,997,724 9201 mRNA_834: 9202 - HMMPfam-HIT zinc finger-PF04438,ProSiteProfiles-Zinc finger HIT-type profile.-PS51083,SUPERFAMILY--SSF144232, at 1,998,039 to 1,998,977 9202 mRNA_835: 9203 - K16365 SGTA small glutamine-rich tetratricopeptide repeat-containing protein alpha, at 1,999,158 to 2,000,866 9203 mRNA_836: 9204 - K17387 KIF23 kinesin family member 23, at 2,001,159 to 2,005,251 9204 mRNA_837: 9205 - KOG2061 Uncharacterized MYND Zn-finger protein, at 2,005,552 to 2,007,276 9205
Group Condition mRNA_833 mRNA_834 mRNA_835 mRNA_836 mRNA_837
9201 9202 9203 9204 9205
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 N.D. -0.4 -1.6 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -1.0 N.D. -0.1 -0.6 N.D.
growth on ricinoleic acid YNB Glucose -0.7 N.D. -0.1 -0.6 N.D.
growth on ypd YPD -1.1 N.D. -0.0 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. -0.5 -0.3 N.D.
auxotrophy Dropout Complete -0.8 N.D. +0.3 -0.4 N.D.
growth on oleic acid YNB Glucose -0.5 N.D. -0.2 -0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.7 N.D. +0.2 -0.4 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.6 N.D. +0.3 -0.5 N.D.
growth on oleic acid YNB Oleic Acid -0.4 N.D. -0.5 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. -0.6 +0.1 N.D.
auxotrophy YNB Glucose -0.4 N.D. +0.6 -0.6 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. -0.6 +0.6 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 N.D. -0.5 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. -0.1 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 N.D. -0.1 +0.6 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. +0.1 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.4 N.D. -0.1 +0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. -0.1 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. +0.1 +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. -0.1 +0.5 N.D.
remove
mRNA_833
plot		 remove
mRNA_834
plot		 remove
mRNA_835		 remove
mRNA_836
plot		 remove
mRNA_837
plot