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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9205 and 9206 are separated by 598 nucleotides
9206 and 9207 are separated by 272 nucleotides
9207 and 9208 are separated by 541 nucleotides
9208 and 9209 are separated by 758 nucleotides
mRNA_837: 9205 - KOG2061 Uncharacterized MYND Zn-finger protein, at 2,005,552 to 2,007,276
9205
mRNA_838: 9206 - K06628 CDC45 cell division control protein 45, at 2,007,875 to 2,010,622
9206
mRNA_839: 9207 - BLAST protein of unknown function DUF1746, fungi [Rhodo..., at 2,010,895 to 2,011,512
9207
mRNA_840: 9208 - BLAST protein of unknown function DUF1746, fungi [Rhodo..., at 2,012,054 to 2,014,320
9208
mRNA_841: 9209 - HMMPfam-Kinetochore protein CHL4 like-PF05238, at 2,015,079 to 2,016,824
9209
Group
Condition
mRNA
_837
mRNA
_838
mRNA
_839
mRNA
_840
mRNA
_841
9205
9206
9207
9208
9209
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
N.D.
-1.2
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
N.D.
-0.9
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
N.D.
-0.7
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
N.D.
-0.7
-0.1
growth on oleic acid
YNB Glucose
N.D.
N.D.
N.D.
-0.7
+0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
N.D.
-0.5
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
N.D.
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
N.D.
-0.6
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
-0.5
+0.2
auxotrophy
Dropout Complete
N.D.
N.D.
N.D.
-0.4
+0.4
auxotrophy
YNB Glucose
N.D.
N.D.
N.D.
-0.2
+0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
+0.3
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
+0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
-0.1
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
N.D.
-0.1
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
-0.3
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
+0.2
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
N.D.
+0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
N.D.
+0.5
-0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
N.D.
+0.3
+0.0
growth on ypd
YPD
N.D.
N.D.
N.D.
+0.7
-0.2
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