Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9209 and 9210 are separated by 195 nucleotides
9210 and 9211 are separated by 107 nucleotides
9211 and 9212 are separated by 257 nucleotides
9212 and 9213 are separated by 568 nucleotides
mRNA_841: 9209 - HMMPfam-Kinetochore protein CHL4 like-PF05238, at 2,015,079 to 2,016,824
9209
mRNA_842: 9210 - K02148 ATPeV1C, ATP6C V-type H+-transporting ATPase subunit C, at 2,017,020 to 2,018,936
9210
mRNA_843: 9211 - KOG2262 Sexual differentiation process protein ISP4, at 2,019,044 to 2,022,236
9211
mRNA_844: 9212 - KOG1111 N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase, at 2,022,494 to 2,024,852
9212
mRNA_845: 9213 - KOG3346 Phosphatidylethanolamine binding protein, at 2,025,421 to 2,026,759
9213
Group
Condition
mRNA
_841
mRNA
_842
mRNA
_843
mRNA
_844
mRNA
_845
9209
9210
9211
9212
9213
growth on ypd
YPD
-0.2
N.D.
-0.1
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
N.D.
+0.1
-0.5
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.3
N.D.
+0.0
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
N.D.
+0.2
-0.6
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
N.D.
-0.1
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
N.D.
+0.0
-0.3
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
N.D.
+0.4
-0.3
-0.1
auxotrophy
Dropout Complete
+0.4
N.D.
-0.1
-0.6
+0.3
ypd buoyancy
40 hrs High Buoyancy
+0.0
N.D.
+0.1
+0.0
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
N.D.
-0.1
+0.4
+0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.4
N.D.
-0.1
-0.2
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.1
N.D.
+0.1
-0.1
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
N.D.
-0.3
+0.3
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.1
N.D.
+0.0
+0.1
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
N.D.
+0.4
-0.0
+0.2
growth on oleic acid
YNB Oleic Acid
+0.2
N.D.
+0.0
+0.3
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
N.D.
-0.0
+0.4
+0.1
growth on oleic acid
YNB Glucose
+0.2
N.D.
+0.5
+0.0
-0.0
growth on ricinoleic acid
YNB Glucose
+0.1
N.D.
+0.5
+0.1
+0.1
auxotrophy
YNB Glucose
+0.2
N.D.
+0.3
+0.1
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
N.D.
+0.2
+0.7
+0.0
remove
mRNA_841
plot
remove
mRNA_842
plot
remove
mRNA_843
remove
mRNA_844
plot
remove
mRNA_845
plot