Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9210 and 9211 are separated by 107 nucleotides9211 and 9212 are separated by 257 nucleotides9212 and 9213 are separated by 568 nucleotides9213 and 9214 are separated by 774 nucleotides mRNA_842: 9210 - K02148 ATPeV1C, ATP6C V-type H+-transporting ATPase subunit C, at 2,017,020 to 2,018,936 9210 mRNA_843: 9211 - KOG2262 Sexual differentiation process protein ISP4, at 2,019,044 to 2,022,236 9211 mRNA_844: 9212 - KOG1111 N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase, at 2,022,494 to 2,024,852 9212 mRNA_845: 9213 - KOG3346 Phosphatidylethanolamine binding protein, at 2,025,421 to 2,026,759 9213 mRNA_846: 9214 - KOG2710 Rho GTPase-activating protein, at 2,027,534 to 2,029,466 9214
Group Condition mRNA_842 mRNA_843 mRNA_844 mRNA_845 mRNA_846
9210 9211 9212 9213 9214
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 -0.5 -0.2 -0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 -0.3 -0.2 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 -0.2 -0.1 -0.5
auxotrophy Dropout Complete N.D. -0.1 -0.6 +0.3 -0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 +0.4 +0.0 -0.8
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 -0.2 +0.0 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.3 +0.3 -0.3 +0.1
growth on ypd YPD N.D. -0.1 -0.1 -0.2 +0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.0 -0.0 -0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 +0.0 -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 -0.1 +0.0 +0.0
auxotrophy YNB Glucose 75mM Arginine N.D. +0.0 +0.1 +0.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.4 -0.3 -0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.2 +0.7 +0.0 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 -0.6 -0.2 +0.8
growth on oleic acid YNB Oleic Acid N.D. +0.0 +0.3 +0.0 -0.0
growth on oleic acid YNB Glucose N.D. +0.5 +0.0 -0.0 -0.0
auxotrophy YNB Glucose N.D. +0.3 +0.1 +0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.4 -0.0 +0.2 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.0 +0.4 +0.1 +0.2
growth on ricinoleic acid YNB Glucose N.D. +0.5 +0.1 +0.1 +0.0
remove
mRNA_842
plot
remove
mRNA_843
plot
remove
mRNA_844
remove
mRNA_845
plot
remove
mRNA_846
plot