Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9213 and 9214 are separated by 774 nucleotides9214 and 9215 are separated by 265 nucleotides9215 and 9216 are separated by 477 nucleotides9216 and 9217 are separated by 173 nucleotides mRNA_845: 9213 - KOG3346 Phosphatidylethanolamine binding protein, at 2,025,421 to 2,026,759 9213 mRNA_846: 9214 - KOG2710 Rho GTPase-activating protein, at 2,027,534 to 2,029,466 9214 mRNA_847: 9215 - HMMPfam-Amino acid permease-PF13520, at 2,029,732 to 2,032,618 9215 mRNA_848: 9216 - K17989 SDS, SDH, CHA1 L-serine/L-threonine ammonia-lyase, at 2,033,096 to 2,034,366 9216 mRNA_849: 9217 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 2,034,540 to 2,035,724 9217
Group Condition mRNA_845 mRNA_846 mRNA_847 mRNA_848 mRNA_849
9213 9214 9215 9216 9217
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.1 -0.2 -0.4 -0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.8 +0.0 -0.6 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.5 -0.4 +0.0 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.7 +0.3 -0.8 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.9 -0.2 +0.2 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.2 -0.2 -0.0 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.0 +0.2 -0.2 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.0 +0.3 -0.0 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.2 +0.2 +0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 +0.1 +0.1 -0.2
growth on ricinoleic acid YNB Glucose +0.1 +0.0 +0.1 +0.1 -0.1
growth on ypd YPD -0.2 +0.4 +0.0 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.8 -0.4 -0.3 +0.5
growth on oleic acid YNB Oleic Acid +0.0 -0.0 -0.0 +0.7 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.2 +0.2 +0.1 -0.2
auxotrophy Dropout Complete +0.3 -0.4 +0.1 +0.1 +0.5
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.2 +0.1 +0.1 +0.5
growth on oleic acid YNB Glucose -0.0 -0.0 +0.1 +0.7 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.5 -0.1 +0.8 +0.5
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.3 +0.2 +0.2 +0.4
auxotrophy YNB Glucose +0.2 -0.1 +0.0 +0.2 +0.6
remove
mRNA_845
plot
remove
mRNA_846
plot
remove
mRNA_847
remove
mRNA_848
plot
remove
mRNA_849
plot