Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9216 and 9217 are separated by 173 nucleotides
9217 and 9218 are separated by 1141 nucleotides
9218 and 9219 are separated by 969 nucleotides
9219 and 9220 are separated by 73 nucleotides
mRNA_848: 9216 - K17989 SDS, SDH, CHA1 L-serine/L-threonine ammonia-lyase, at 2,033,096 to 2,034,366
9216
mRNA_849: 9217 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 2,034,540 to 2,035,724
9217
mRNA_850: 9218 - SUPERFAMILY--SSF52047, at 2,036,866 to 2,038,448
9218
mRNA_851: 9219 - HMMPfam-Lipase (class 3)-PF01764,SUPERFAMILY--SSF53474, at 2,039,418 to 2,042,658
9219
mRNA_852: 9220 - K01923 purC phosphoribosylaminoimidazole-succinocarboxamide synthase, at 2,042,732 to 2,043,876
9220
Group
Condition
mRNA
_848
mRNA
_849
mRNA
_850
mRNA
_851
mRNA
_852
9216
9217
9218
9219
9220
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.6
-0.9
-0.5
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.4
-0.8
+0.2
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.4
-0.4
+0.3
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
+0.1
+0.3
-0.5
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.2
-0.6
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.2
-0.2
-0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.2
-0.2
+0.2
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.3
+0.1
+0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.2
+0.1
-0.0
N.D.
growth on ricinoleic acid
YNB Glucose
+0.1
-0.1
-0.0
+0.2
N.D.
growth on ypd
YPD
-0.1
+0.3
+0.3
-0.2
N.D.
auxotrophy
Dropout Complete
+0.1
+0.5
-0.4
+0.4
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.4
+0.4
-0.4
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.8
+0.4
+1.0
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.4
-0.3
+0.3
N.D.
growth on oleic acid
YNB Glucose
+0.7
-0.1
+0.2
+0.0
N.D.
growth on oleic acid
YNB Oleic Acid
+0.7
-0.4
+0.4
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.5
+1.1
-0.4
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.5
-0.1
+0.4
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.8
+0.5
+0.5
-0.5
N.D.
auxotrophy
YNB Glucose
+0.2
+0.6
+0.2
+0.3
N.D.
remove
mRNA_848
plot
remove
mRNA_849
plot
remove
mRNA_850
remove
mRNA_851
plot
remove
mRNA_852
plot