Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9216 and 9217 are separated by 173 nucleotides9217 and 9218 are separated by 1141 nucleotides9218 and 9219 are separated by 969 nucleotides9219 and 9220 are separated by 73 nucleotides mRNA_848: 9216 - K17989 SDS, SDH, CHA1 L-serine/L-threonine ammonia-lyase, at 2,033,096 to 2,034,366 9216 mRNA_849: 9217 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 2,034,540 to 2,035,724 9217 mRNA_850: 9218 - SUPERFAMILY--SSF52047, at 2,036,866 to 2,038,448 9218 mRNA_851: 9219 - HMMPfam-Lipase (class 3)-PF01764,SUPERFAMILY--SSF53474, at 2,039,418 to 2,042,658 9219 mRNA_852: 9220 - K01923 purC phosphoribosylaminoimidazole-succinocarboxamide synthase, at 2,042,732 to 2,043,876 9220
Group Condition mRNA_848 mRNA_849 mRNA_850 mRNA_851 mRNA_852
9216 9217 9218 9219 9220
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.6 -0.9 -0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.4 -0.8 +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.4 -0.4 +0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.6 +0.1 +0.3 -0.5 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.2 -0.6 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.2 -0.2 -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.2 -0.2 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.3 +0.1 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.2 +0.1 -0.0 N.D.
growth on ricinoleic acid YNB Glucose +0.1 -0.1 -0.0 +0.2 N.D.
growth on ypd YPD -0.1 +0.3 +0.3 -0.2 N.D.
auxotrophy Dropout Complete +0.1 +0.5 -0.4 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.4 +0.4 -0.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.8 +0.4 +1.0 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.4 -0.3 +0.3 N.D.
growth on oleic acid YNB Glucose +0.7 -0.1 +0.2 +0.0 N.D.
growth on oleic acid YNB Oleic Acid +0.7 -0.4 +0.4 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.5 +1.1 -0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.5 -0.1 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.8 +0.5 +0.5 -0.5 N.D.
auxotrophy YNB Glucose +0.2 +0.6 +0.2 +0.3 N.D.
remove
mRNA_848
plot
remove
mRNA_849
plot
remove
mRNA_850
remove
mRNA_851
plot
remove
mRNA_852
plot