Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9217 and 9218 are separated by 1141 nucleotides9218 and 9219 are separated by 969 nucleotides9219 and 9220 are separated by 73 nucleotides9220 and 9221 are separated by 308 nucleotides mRNA_849: 9217 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 2,034,540 to 2,035,724 9217 mRNA_850: 9218 - SUPERFAMILY--SSF52047, at 2,036,866 to 2,038,448 9218 mRNA_851: 9219 - HMMPfam-Lipase (class 3)-PF01764,SUPERFAMILY--SSF53474, at 2,039,418 to 2,042,658 9219 mRNA_852: 9220 - K01923 purC phosphoribosylaminoimidazole-succinocarboxamide synthase, at 2,042,732 to 2,043,876 9220 mRNA_853: 9221 - K13125 NOSIP nitric oxide synthase-interacting protein, at 2,044,185 to 2,045,369 9221
Group Condition mRNA_849 mRNA_850 mRNA_851 mRNA_852 mRNA_853
9217 9218 9219 9220 9221
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.9 -0.5 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.8 +0.2 N.D. +0.0
growth on oleic acid YNB Glucose -0.1 +0.2 +0.0 N.D. -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.2 -0.2 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.3 -0.5 N.D. -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.4 +0.3 N.D. +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.6 +0.3 N.D. +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.2 +0.2 N.D. +0.0
auxotrophy YNB Glucose 75mM Arginine +0.4 -0.3 +0.3 N.D. -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.1 -0.0 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.1 +0.1 N.D. +0.0
growth on oleic acid YNB Oleic Acid -0.4 +0.4 +0.1 N.D. -0.0
auxotrophy Dropout Complete +0.5 -0.4 +0.4 N.D. -0.4
growth on ricinoleic acid YNB Glucose -0.1 -0.0 +0.2 N.D. +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 +0.5 -0.5 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.4 -0.4 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine +0.5 -0.1 +0.4 N.D. -0.3
auxotrophy YNB Glucose +0.6 +0.2 +0.3 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +1.1 -0.4 N.D. -0.3
growth on ypd YPD +0.3 +0.3 -0.2 N.D. +0.7
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +1.0 -0.1 N.D. +0.2
remove
mRNA_849
plot
remove
mRNA_850
plot
remove
mRNA_851
remove
mRNA_852
plot
remove
mRNA_853
plot