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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9221 and 9222 are separated by 75 nucleotides
9222 and 9223 are separated by 286 nucleotides
9223 and 9224 are separated by 172 nucleotides
9224 and 9225 are separated by 165 nucleotides
mRNA_853: 9221 - K13125 NOSIP nitric oxide synthase-interacting protein, at 2,044,185 to 2,045,369
9221
mRNA_854: 9222 - K01620 ltaE threonine aldolase, at 2,045,445 to 2,046,969
9222
mRNA_855: 9223 - BLAST Phosphoribosyltransferase C-terminal [Ceraceosorus bo..., at 2,047,256 to 2,049,795
9223
mRNA_856: 9224 - KOG0828 Predicted E3 ubiquitin ligase, at 2,049,968 to 2,053,108
9224
mRNA_857: 9225 - K14565 NOP58 nucleolar protein 58, at 2,053,274 to 2,055,374
9225
Group
Condition
mRNA
_853
mRNA
_854
mRNA
_855
mRNA
_856
mRNA
_857
9221
9222
9223
9224
9225
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
+0.0
-0.3
-1.7
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.6
+0.3
+0.1
-1.7
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.1
-0.2
-1.3
N.D.
auxotrophy
YNB Glucose
-0.3
+0.2
-0.1
-1.2
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
-0.6
-0.3
-0.4
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.3
-0.2
-0.8
N.D.
auxotrophy
Dropout Complete
-0.4
+0.1
-0.0
-0.8
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.2
+0.0
-1.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.2
-0.1
-0.5
N.D.
growth on oleic acid
YNB Glucose
-0.4
+0.1
-0.1
-0.5
N.D.
growth on ricinoleic acid
YNB Glucose
+0.3
-0.2
-0.1
-0.8
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.1
-0.2
-0.5
N.D.
growth on ypd
YPD
+0.7
+0.2
-0.0
-1.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.1
+0.0
+0.0
N.D.
growth on oleic acid
YNB Oleic Acid
-0.0
+0.0
-0.1
-0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
-0.3
-0.0
+0.0
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.2
-0.2
-0.4
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.2
-0.0
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.2
+0.0
+0.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.2
-0.0
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.2
-0.1
+0.8
N.D.
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