Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9222 and 9223 are separated by 286 nucleotides9223 and 9224 are separated by 172 nucleotides9224 and 9225 are separated by 165 nucleotides9225 and 9226 are separated by 504 nucleotides mRNA_854: 9222 - K01620 ltaE threonine aldolase, at 2,045,445 to 2,046,969 9222 mRNA_855: 9223 - BLAST Phosphoribosyltransferase C-terminal [Ceraceosorus bo..., at 2,047,256 to 2,049,795 9223 mRNA_856: 9224 - KOG0828 Predicted E3 ubiquitin ligase, at 2,049,968 to 2,053,108 9224 mRNA_857: 9225 - K14565 NOP58 nucleolar protein 58, at 2,053,274 to 2,055,374 9225 mRNA_858: 9226 - K10599 PRPF19, PRP19 pre-mRNA-processing factor 19, at 2,055,879 to 2,057,799 9226
Group Condition mRNA_854 mRNA_855 mRNA_856 mRNA_857 mRNA_858
9222 9223 9224 9225 9226
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 -0.5 N.D. -3.3
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.1 -1.7 N.D. -2.4
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.2 -1.3 N.D. -2.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.0 +0.3 N.D. -4.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.1 +0.8 N.D. -3.6
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.2 -0.4 N.D. -1.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.0 +0.0 N.D. -2.1
growth on oleic acid YNB Glucose +0.1 -0.1 -0.5 N.D. -1.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.0 +0.0 N.D. -1.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.3 -1.7 N.D. +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.0 +0.1 N.D. -1.2
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.0 -1.1 N.D. -0.3
growth on ricinoleic acid YNB Glucose -0.2 -0.1 -0.8 N.D. +0.6
auxotrophy YNB Glucose +0.2 -0.1 -1.2 N.D. +0.6
growth on oleic acid YNB Oleic Acid +0.0 -0.1 -0.1 N.D. +0.1
auxotrophy Dropout Complete +0.1 -0.0 -0.8 N.D. +0.9
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.3 -0.4 N.D. +1.4
growth on ypd YPD +0.2 -0.0 -1.1 N.D. +2.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 -0.5 N.D. +1.9
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.2 -0.8 N.D. +3.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.0 +0.2 N.D. +2.1
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