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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9230 and 9231 are separated by 610 nucleotides
9231 and 9232 are separated by 385 nucleotides
9232 and 9233 are separated by 344 nucleotides
9233 and 9234 are separated by 265 nucleotides
mRNA_862: 9230 - KOG2867 Phosphotyrosyl phosphatase activator, at 2,065,733 to 2,067,114
9230
mRNA_863: 9231 - K11254 H4 histone H4, at 2,067,725 to 2,068,182
9231
mRNA_864: 9232 - K11253 H3 histone H3, at 2,068,568 to 2,069,276
9232
mRNA_865: 9233 - Hypothetical Protein, at 2,069,621 to 2,070,853
9233
mRNA_866: 9234 - HMMPfam-Cryptococcal mannosyltransferase 1-PF11735, at 2,071,119 to 2,072,862
9234
Group
Condition
mRNA
_862
mRNA
_863
mRNA
_864
mRNA
_865
mRNA
_866
9230
9231
9232
9233
9234
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.9
-2.3
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.3
-1.6
-0.1
-1.4
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.1
-2.0
-0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
-0.8
-1.5
-0.3
+0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.0
-0.9
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.1
-0.6
+0.2
-0.9
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.1
-0.6
-0.1
-0.4
auxotrophy
Dropout Complete
-0.4
+0.2
-1.3
+0.1
-0.0
growth on ricinoleic acid
YNB Glucose
-0.3
-0.5
-0.6
+0.3
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
+0.1
-0.6
+0.2
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
+0.1
-0.3
-0.4
-0.3
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.2
-1.0
+0.2
-0.0
growth on oleic acid
YNB Glucose
-0.0
-0.1
-0.5
+0.1
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.3
+0.0
-0.2
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.1
-0.1
+0.3
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.1
-0.9
+0.3
+0.3
auxotrophy
YNB Glucose
-0.1
+0.4
-0.1
-0.1
-0.1
growth on ypd
YPD
-0.3
+0.2
-0.7
+0.9
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.4
+0.2
-0.3
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.3
+0.2
-0.1
+0.2
+0.2
growth on oleic acid
YNB Oleic Acid
+0.1
+0.6
+0.0
+0.3
+0.6
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