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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9237 and 9238 are separated by 158 nucleotides
9238 and 9239 are separated by 271 nucleotides
9239 and 9240 are separated by 19 nucleotides
9240 and 9241 are separated by 284 nucleotides
mRNA_869: 9237 - K17605 PPP2R4, PTPA serine/threonine-protein phosphatase 2A activator, at 2,076,374 to 2,078,080
9237
mRNA_870: 9238 - KOG0679 Actin-related protein - Arp4p/Act3p, at 2,078,239 to 2,080,203
9238
mRNA_871: 9239 - BLAST lanosterol synthase [Microbotryum lychnidis-dioicae p..., at 2,080,475 to 2,080,915
9239
mRNA_872: 9240 - K01852 LSS, ERG7 lanosterol synthase, at 2,080,935 to 2,083,844
9240
mRNA_873: 9241 - K17497 PMM phosphomannomutase, at 2,084,129 to 2,085,860
9241
Group
Condition
mRNA
_869
mRNA
_870
mRNA
_871
mRNA
_872
mRNA
_873
9237
9238
9239
9240
9241
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.7
N.D.
N.D.
N.D.
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
N.D.
N.D.
N.D.
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
N.D.
N.D.
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
N.D.
N.D.
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
N.D.
N.D.
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
N.D.
N.D.
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.0
N.D.
N.D.
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.0
N.D.
N.D.
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.0
N.D.
N.D.
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
N.D.
N.D.
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
N.D.
N.D.
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
+0.3
N.D.
N.D.
N.D.
N.D.
growth on ypd
YPD
+0.4
N.D.
N.D.
N.D.
N.D.
auxotrophy
Dropout Complete
+0.4
N.D.
N.D.
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.5
N.D.
N.D.
N.D.
N.D.
growth on oleic acid
YNB Glucose
+0.5
N.D.
N.D.
N.D.
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.6
N.D.
N.D.
N.D.
N.D.
auxotrophy
YNB Glucose
+0.6
N.D.
N.D.
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.7
N.D.
N.D.
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.7
N.D.
N.D.
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
+0.8
N.D.
N.D.
N.D.
N.D.
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