Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9241 and 9242 are separated by 329 nucleotides9242 and 9243 are separated by 25 nucleotides9243 and 9244 are separated by 678 nucleotides9244 and 9245 are separated by 804 nucleotides mRNA_873: 9241 - K17497 PMM phosphomannomutase, at 2,084,129 to 2,085,860 9241 mRNA_874: 9242 - BLAST Pc13g07060 [Penicillium rubens Wisconsin 54-1255], at 2,086,190 to 2,086,635 9242 mRNA_875: 9243 - KOG2401 Predicted MutS-related protein involved in mismatch repair, at 2,086,661 to 2,088,947 9243 mRNA_876: 9244 - K00297 metF, MTHFR methylenetetrahydrofolate reductase (NADPH), at 2,089,626 to 2,091,862 9244 mRNA_877: 9245 - K07425 CYP4A alkane 1-monooxygenase, at 2,092,667 to 2,095,053 9245
Group Condition mRNA_873 mRNA_874 mRNA_875 mRNA_876 mRNA_877
9241 9242 9243 9244 9245
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.6 -0.1 -4.0 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.6 -0.4 -3.6 +0.5
growth on oleic acid YNB Glucose N.D. -0.7 +0.3 -3.3 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 +0.1 -3.7 +0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.4 -0.3 -2.6 -0.0
auxotrophy YNB Glucose 75mM Arginine N.D. -0.3 +0.2 -3.0 -0.1
growth on ricinoleic acid YNB Glucose N.D. -0.4 +0.1 -3.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -1.2 +0.2 -1.8 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.6 -0.2 -3.4 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.0 +0.1 -2.7 +0.2
growth on oleic acid YNB Oleic Acid N.D. -0.2 +0.1 -2.4 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.6 +0.2 -2.1 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.7 +0.5 -3.7 +0.2
auxotrophy YNB Glucose N.D. -0.2 -0.1 -1.8 +0.0
growth on ypd YPD N.D. -0.8 -0.4 +0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 -0.4 -0.8 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.7 -0.2 -0.3 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.3 -0.2 +0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 -0.1 -0.5 +0.2
auxotrophy Dropout Complete N.D. +0.0 -0.3 +0.6 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 +0.2 +1.0 +0.0
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