Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9251 and 9252 are separated by 2257 nucleotides9252 and 9253 are separated by 118 nucleotides9253 and 9254 are separated by 512 nucleotides9254 and 9255 are separated by 1028 nucleotides mRNA_883: 9251 - Hypothetical Protein, at 2,106,962 to 2,108,755 9251 mRNA_884: 9252 - Hypothetical Protein, at 2,111,013 to 2,111,465 9252 mRNA_885: 9253 - K10590 TRIP12 E3 ubiquitin-protein ligase TRIP12, at 2,111,584 to 2,117,077 9253 mRNA_886: 9254 - KOG2504 Monocarboxylate transporter, at 2,117,590 to 2,119,437 9254 mRNA_887: 9255 - K04409 PAK1 p21-activated kinase 1, at 2,120,466 to 2,123,959 9255
Group Condition mRNA_883 mRNA_884 mRNA_885 mRNA_886 mRNA_887
9251 9252 9253 9254 9255
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.2 -0.6 -0.4 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.6 -1.6 -0.1 +0.1
auxotrophy Dropout Complete N.D. -0.2 -0.0 -0.3 +0.1
growth on ypd YPD N.D. -0.4 +0.0 +0.3 -0.0
auxotrophy YNB Glucose N.D. -0.4 +0.1 -0.0 +0.4
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 +0.2 -0.2 +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. -0.4 +0.2 +0.2 +0.3
growth on ricinoleic acid YNB Glucose N.D. -0.0 -0.4 +0.1 +0.7
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 +0.0 -0.2 +0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.5 -0.3 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 +0.0 -0.1 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 -0.6 +0.1 +1.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.4 -0.0 -0.0 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 +0.2 -0.2 +0.6
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.8 +0.1 -0.1 +0.2
growth on oleic acid YNB Glucose N.D. +0.2 +0.2 -0.0 +0.6
growth on oleic acid YNB Oleic Acid N.D. +0.0 +0.3 -0.1 +0.8
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.7 +0.1 +0.3 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 -0.2 +0.3 +1.4
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.6 -0.1 +0.5 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.7 +1.0 +0.2 +0.1
remove
mRNA_883
plot
remove
mRNA_884
plot
remove
mRNA_885
remove
mRNA_886
plot
remove
mRNA_887
plot