Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9253 and 9254 are separated by 512 nucleotides
9254 and 9255 are separated by 1028 nucleotides
9255 and 9256 are separated by 200 nucleotides
9256 and 9257 are separated by 986 nucleotides
mRNA_885: 9253 - K10590 TRIP12 E3 ubiquitin-protein ligase TRIP12, at 2,111,584 to 2,117,077
9253
mRNA_886: 9254 - KOG2504 Monocarboxylate transporter, at 2,117,590 to 2,119,437
9254
mRNA_887: 9255 - K04409 PAK1 p21-activated kinase 1, at 2,120,466 to 2,123,959
9255
mRNA_888: 9256 - KOG1773 Stress responsive protein, at 2,124,160 to 2,125,041
9256
mRNA_889: 9257 - HMMPfam-Ribonuclease III domain-PF00636,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF69065, at 2,126,028 to 2,126,699
9257
Group
Condition
mRNA
_885
mRNA
_886
mRNA
_887
mRNA
_888
mRNA
_889
9253
9254
9255
9256
9257
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.4
-0.3
-0.3
-0.9
auxotrophy
Dropout Complete
-0.0
-0.3
+0.1
-0.7
+0.1
growth on ricinoleic acid
YNB Glucose
-0.4
+0.1
+0.7
-0.5
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.6
-0.1
+0.1
+0.0
+1.1
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.2
+0.3
-0.7
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.1
+0.2
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.2
+0.3
-0.5
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.0
+0.3
-0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
+0.1
+1.2
-0.4
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
+0.2
-0.1
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.5
+0.6
-0.3
-0.6
auxotrophy
YNB Glucose
+0.1
-0.0
+0.4
-0.3
+0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.2
+0.4
+0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.3
+0.2
+0.1
+0.0
growth on ypd
YPD
+0.0
+0.3
-0.0
-0.1
+0.6
growth on oleic acid
YNB Glucose
+0.2
-0.0
+0.6
-0.1
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.3
+1.4
-0.4
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
-0.1
+0.5
-0.0
+0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.2
+0.6
-0.0
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.0
+0.2
+0.1
-0.6
+0.5
growth on oleic acid
YNB Oleic Acid
+0.3
-0.1
+0.8
+0.5
-0.3
remove
mRNA_885
plot
remove
mRNA_886
plot
remove
mRNA_887
remove
mRNA_888
plot
remove
mRNA_889
plot