Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9257 and 9258 are separated by 120 nucleotides9258 and 9259 are separated by 327 nucleotides9259 and 9260 are separated by 456 nucleotides9260 and 9261 are separated by 1659 nucleotides mRNA_889: 9257 - HMMPfam-Ribonuclease III domain-PF00636,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF69065, at 2,126,028 to 2,126,699 9257 mRNA_890: 9258 - HMMPfam-Double-stranded RNA binding motif-PF00035,HMMPfam-Ribonuclease-III-like-PF14622,ProSiteProfiles-Double stranded RNA-binding domain (dsRBD) profile.-PS50137,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Double-stranded RNA binding motif-SM00358,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF54768,SUPERFAMILY--SSF69065, at 2,126,820 to 2,127,805 9258 mRNA_891: 9259 - K01405 PRD1 saccharolysin, at 2,128,133 to 2,130,693 9259 mRNA_892: 9260 - K11827 AP2S1 AP-2 complex subunit sigma-1, at 2,131,150 to 2,131,840 9260 mRNA_893: 9261 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 2,133,500 to 2,134,793 9261
Group Condition mRNA_889 mRNA_890 mRNA_891 mRNA_892 mRNA_893
9257 9258 9259 9260 9261
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 -0.9 -0.4 N.D. -0.4
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.4 -0.1 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 -0.2 N.D. -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.0 -0.2 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 -0.4 +0.1 N.D. -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 -0.4 +0.1 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.3 +0.1 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 +0.6 +0.4 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 -0.4 +0.2 N.D. -0.0
growth on ricinoleic acid YNB Glucose -0.6 +0.1 +0.1 N.D. +0.6
growth on ypd YPD +0.6 -0.2 +0.2 N.D. -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.0 +0.2 N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.2 -0.0 N.D. -0.0
auxotrophy Dropout Complete +0.1 +0.3 +0.0 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.0 +0.1 N.D. +0.6
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.5 +0.1 N.D. +0.1
growth on oleic acid YNB Oleic Acid -0.3 +0.3 +0.1 N.D. +0.5
auxotrophy YNB Glucose +0.0 +0.3 +0.3 N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.3 +0.3 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.1 -0.3 +0.2 N.D. -0.0
growth on oleic acid YNB Glucose +0.3 +0.3 +0.3 N.D. +0.2
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