Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9259 and 9260 are separated by 456 nucleotides9260 and 9261 are separated by 1659 nucleotides9261 and 9262 are separated by 350 nucleotides9262 and 9263 are separated by 81 nucleotides mRNA_891: 9259 - K01405 PRD1 saccharolysin, at 2,128,133 to 2,130,693 9259 mRNA_892: 9260 - K11827 AP2S1 AP-2 complex subunit sigma-1, at 2,131,150 to 2,131,840 9260 mRNA_893: 9261 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 2,133,500 to 2,134,793 9261 mRNA_894: 9262 - K01694 TRP tryptophan synthase, at 2,135,144 to 2,138,242 9262 mRNA_895: 9263 - Hypothetical Protein, at 2,138,324 to 2,139,177 9263
Group Condition mRNA_891 mRNA_892 mRNA_893 mRNA_894 mRNA_895
9259 9260 9261 9262 9263
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 N.D. -0.4 N.D. -1.3
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. -0.0 N.D. -0.9
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. -0.3 N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 N.D. -0.2 N.D. -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. -0.1 N.D. +0.0
growth on ypd YPD +0.2 N.D. -0.3 N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. -0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. -0.1 N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. +0.2 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. +0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. -0.5 N.D. +1.0
auxotrophy YNB Glucose +0.3 N.D. +0.2 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. +0.2 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. -0.3 N.D. +0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. -0.0 N.D. +0.6
growth on ricinoleic acid YNB Glucose +0.1 N.D. +0.6 N.D. -0.0
auxotrophy Dropout Complete +0.0 N.D. +0.0 N.D. +0.7
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. +0.6 N.D. +0.1
growth on oleic acid YNB Glucose +0.3 N.D. +0.2 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. -0.0 N.D. +1.2
growth on oleic acid YNB Oleic Acid +0.1 N.D. +0.5 N.D. +0.9
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