Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9267 and 9268 are separated by 96 nucleotides9268 and 9269 are separated by 176 nucleotides9269 and 9270 are separated by 349 nucleotides9270 and 9271 are separated by 285 nucleotides mRNA_899: 9267 - K00486 KMO kynurenine 3-monooxygenase, at 2,144,994 to 2,146,885 9267 mRNA_900: 9268 - SUPERFAMILY--SSF52266, at 2,146,982 to 2,149,051 9268 mRNA_901: 9269 - SUPERFAMILY--SSF52266, at 2,149,228 to 2,151,284 9269 mRNA_902: 9270 - KOG2398 Predicted proline-serine-threonine phosphatase-interacting protein (PSTPIP), at 2,151,634 to 2,155,672 9270 mRNA_903: 9271 - Hypothetical Protein, at 2,155,958 to 2,156,725 9271
Group Condition mRNA_899 mRNA_900 mRNA_901 mRNA_902 mRNA_903
9267 9268 9269 9270 9271
auxotrophy Dropout Complete -0.7 +0.0 +0.2 -0.7 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.1 +0.3 -1.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.3 -0.2 -0.4 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.3 -0.1 -0.5 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.2 +0.1 +0.5 -0.7
growth on ricinoleic acid YNB Glucose -0.5 +0.1 +0.4 -0.4 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.0 +0.1 -0.3 +0.1
growth on ypd YPD -0.1 +0.0 +0.4 -0.6 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.1 +0.2 -0.4 +0.4
ypd buoyancy 40 hrs High Buoyancy +0.5 -0.2 -0.1 -0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.5 -0.1 +0.1 -0.1 -0.5
growth on oleic acid YNB Glucose -0.2 +0.1 +0.5 -0.5 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.5 -0.1 -0.1 -0.1 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.1 +0.2 -0.3 +0.3
growth on oleic acid YNB Oleic Acid -0.2 -0.1 +0.3 -0.2 +0.3
auxotrophy YNB Glucose +0.4 +0.0 +0.2 -0.3 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.3 +0.1 +0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.0 -0.1 +0.2 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 +0.1 +0.1 +0.3 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 -0.5 -0.2 +0.5 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.0 +0.2 +0.6 -0.1
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