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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9268 and 9269 are separated by 176 nucleotides
9269 and 9270 are separated by 349 nucleotides
9270 and 9271 are separated by 285 nucleotides
9271 and 9272 are separated by 1341 nucleotides
mRNA_900: 9268 - SUPERFAMILY--SSF52266, at 2,146,982 to 2,149,051
9268
mRNA_901: 9269 - SUPERFAMILY--SSF52266, at 2,149,228 to 2,151,284
9269
mRNA_902: 9270 - KOG2398 Predicted proline-serine-threonine phosphatase-interacting protein (PSTPIP), at 2,151,634 to 2,155,672
9270
mRNA_903: 9271 - Hypothetical Protein, at 2,155,958 to 2,156,725
9271
mRNA_904: 9272 - K04705 STAM signal transducing adaptor molecule, at 2,158,067 to 2,161,022
9272
Group
Condition
mRNA
_900
mRNA
_901
mRNA
_902
mRNA
_903
mRNA
_904
9268
9269
9270
9271
9272
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.2
-0.4
-0.2
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.3
-1.1
-0.3
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
-0.1
-0.5
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.2
+0.5
+0.3
-0.9
auxotrophy
Dropout Complete
+0.0
+0.2
-0.7
-0.4
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.1
-0.1
-0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
-0.1
-0.5
-0.6
+0.3
growth on ricinoleic acid
YNB Glucose
+0.1
+0.4
-0.4
-0.1
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
-0.1
-0.3
+0.1
growth on ypd
YPD
+0.0
+0.4
-0.6
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.1
-0.3
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.1
+0.5
-0.7
+0.3
growth on oleic acid
YNB Glucose
+0.1
+0.5
-0.5
+0.0
-0.1
auxotrophy
YNB Glucose
+0.0
+0.2
-0.3
+0.0
+0.2
growth on oleic acid
YNB Oleic Acid
-0.1
+0.3
-0.2
+0.3
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.2
-0.4
+0.4
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.2
-0.3
+0.3
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.1
+0.3
-0.2
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.1
+0.2
+0.4
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+0.1
+0.2
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.2
+0.6
-0.1
+0.2
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