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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9272 and 9273 are separated by 268 nucleotides
9273 and 9274 are separated by 85 nucleotides
9274 and 9275 are separated by 596 nucleotides
9275 and 9276 are separated by 87 nucleotides
mRNA_904: 9272 - K04705 STAM signal transducing adaptor molecule, at 2,158,067 to 2,161,022
9272
mRNA_905: 9273 - KOG4711 Predicted membrane protein, at 2,161,291 to 2,166,616
9273
mRNA_906: 9274 - K15791 DHKTD1 probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, at 2,166,702 to 2,170,290
9274
mRNA_907: 9275 - K20523 SH3YL1 SH3 domain-containing YSC84-like protein 1, at 2,170,887 to 2,172,443
9275
mRNA_908: 9276 - Hypothetical Protein, at 2,172,531 to 2,173,610
9276
Group
Condition
mRNA
_904
mRNA
_905
mRNA
_906
mRNA
_907
mRNA
_908
9272
9273
9274
9275
9276
ypd buoyancy
40 hrs No Buoyancy Separation
-0.9
+0.1
-0.1
-0.5
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.1
-0.0
-0.9
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.3
+0.0
+0.0
-0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.0
-0.1
-0.1
-0.1
growth on oleic acid
YNB Oleic Acid
-0.1
+0.2
-0.2
-0.3
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.1
-0.0
-0.2
+0.3
growth on ricinoleic acid
YNB Glucose
-0.4
-0.0
-0.2
+0.3
+0.2
auxotrophy
Dropout Complete
-0.0
-0.2
-0.0
+0.3
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.1
-0.3
+0.4
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.0
+0.3
-0.7
+0.4
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.1
-0.0
+0.1
-0.0
growth on oleic acid
YNB Glucose
-0.1
+0.0
-0.3
+0.2
+0.3
growth on ypd
YPD
-0.0
+0.2
+0.0
-0.2
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.1
-0.0
+0.1
+0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.1
-0.1
+0.2
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.0
+0.4
+0.3
-0.0
auxotrophy
YNB Glucose
+0.2
-0.0
-0.1
+0.6
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.1
-0.0
+0.7
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.1
+0.2
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.0
+0.2
+0.5
+0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.0
+0.3
+0.5
+0.3
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