Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9273 and 9274 are separated by 85 nucleotides9274 and 9275 are separated by 596 nucleotides9275 and 9276 are separated by 87 nucleotides9276 and 9277 are separated by 290 nucleotides mRNA_905: 9273 - KOG4711 Predicted membrane protein, at 2,161,291 to 2,166,616 9273 mRNA_906: 9274 - K15791 DHKTD1 probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, at 2,166,702 to 2,170,290 9274 mRNA_907: 9275 - K20523 SH3YL1 SH3 domain-containing YSC84-like protein 1, at 2,170,887 to 2,172,443 9275 mRNA_908: 9276 - Hypothetical Protein, at 2,172,531 to 2,173,610 9276 mRNA_909: 9277 - KOG0254 Predicted transporter (major facilitator superfamily), at 2,173,901 to 2,176,309 9277
Group Condition mRNA_905 mRNA_906 mRNA_907 mRNA_908 mRNA_909
9273 9274 9275 9276 9277
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.0 -0.9 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0 +0.1 +0.5 -0.5
auxotrophy Dropout Complete -0.2 -0.0 +0.3 -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 -0.1 -0.1 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.1 -0.5 +0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.3 +0.4 +0.2 -0.1
growth on oleic acid YNB Oleic Acid +0.2 -0.2 -0.3 +0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 -0.2 -0.0 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 +0.1 -0.0 +0.2
growth on ricinoleic acid YNB Glucose -0.0 -0.2 +0.3 +0.2 -0.1
growth on ypd YPD +0.2 +0.0 -0.2 +0.4 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.3 -0.7 +0.4 +0.3
growth on oleic acid YNB Glucose +0.0 -0.3 +0.2 +0.3 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.0 -0.2 +0.3 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.1 +0.2 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.2 +0.2 +0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0 +0.7 +0.2 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.4 +0.3 -0.0 +0.2
auxotrophy YNB Glucose -0.0 -0.1 +0.6 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.3 +0.5 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.2 +0.5 +0.5 +0.3
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