Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9275 and 9276 are separated by 87 nucleotides9276 and 9277 are separated by 290 nucleotides9277 and 9278 are separated by 525 nucleotides9278 and 9279 are separated by 331 nucleotides mRNA_907: 9275 - K20523 SH3YL1 SH3 domain-containing YSC84-like protein 1, at 2,170,887 to 2,172,443 9275 mRNA_908: 9276 - Hypothetical Protein, at 2,172,531 to 2,173,610 9276 mRNA_909: 9277 - KOG0254 Predicted transporter (major facilitator superfamily), at 2,173,901 to 2,176,309 9277 mRNA_910: 9278 - K00794 ribH, RIB4 6,7-dimethyl-8-ribityllumazine synthase, at 2,176,835 to 2,177,637 9278 mRNA_911: 9279 - KOG1773 Stress responsive protein, at 2,177,969 to 2,178,702 9279
Group Condition mRNA_907 mRNA_908 mRNA_909 mRNA_910 mRNA_911
9275 9276 9277 9278 9279
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 +0.3 +0.1 N.D. -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 +0.4 +0.3 N.D. -0.3
growth on ricinoleic acid YNB Glucose +0.3 +0.2 -0.1 N.D. -0.6
growth on ypd YPD -0.2 +0.4 -0.1 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.0 +0.3 N.D. +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.1 +0.3 N.D. -0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 +0.3 N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.0 +0.2 N.D. -0.1
auxotrophy Dropout Complete +0.3 -0.0 -0.1 N.D. +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.3 +0.1 N.D. +0.3
growth on oleic acid YNB Oleic Acid -0.3 +0.1 +0.2 N.D. +0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.3 +0.4 N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.0 +0.2 N.D. +0.0
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.2 -0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.5 -0.5 N.D. +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.1 -0.0 N.D. +0.3
auxotrophy YNB Glucose +0.6 +0.2 +0.3 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine +0.7 +0.2 +0.0 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 +0.3 -0.2 N.D. +0.3
growth on oleic acid YNB Glucose +0.2 +0.3 +0.2 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.5 +0.3 N.D. +0.1
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