Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9277 and 9278 are separated by 525 nucleotides9278 and 9279 are separated by 331 nucleotides9279 and 9280 are separated by 349 nucleotides9280 and 9281 are separated by 12 nucleotides mRNA_909: 9277 - KOG0254 Predicted transporter (major facilitator superfamily), at 2,173,901 to 2,176,309 9277 mRNA_910: 9278 - K00794 ribH, RIB4 6,7-dimethyl-8-ribityllumazine synthase, at 2,176,835 to 2,177,637 9278 mRNA_911: 9279 - KOG1773 Stress responsive protein, at 2,177,969 to 2,178,702 9279 mRNA_912: 9280 - Hypothetical Protein, at 2,179,052 to 2,180,263 9280 mRNA_913: 9281 - Hypothetical Protein, at 2,180,276 to 2,181,730 9281
Group Condition mRNA_909 mRNA_910 mRNA_911 mRNA_912 mRNA_913
9277 9278 9279 9280 9281
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. -0.1 -0.1 -1.7
auxotrophy YNB Glucose +0.3 N.D. -0.2 +0.2 -1.9
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. -0.4 -0.1 -1.3
auxotrophy YNB Glucose 75mM Methionine +0.0 N.D. -0.0 +0.2 -1.7
auxotrophy Dropout Complete -0.1 N.D. +0.0 -0.2 -1.1
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. +0.2 +0.2 -1.1
growth on ricinoleic acid YNB Glucose -0.1 N.D. -0.6 +0.2 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.3 N.D. +0.0 -0.2 -0.8
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. +0.3 -0.1 -0.7
growth on oleic acid YNB Glucose +0.2 N.D. +0.4 +0.1 -1.0
growth on ypd YPD -0.1 N.D. -0.1 +0.4 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. +0.0 -0.3 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. -0.4 +0.0 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 N.D. -0.3 -0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. +0.0 +0.2 -0.3
growth on oleic acid YNB Oleic Acid +0.2 N.D. +0.5 -0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.4 N.D. -0.0 +0.5 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 N.D. +0.6 +0.9 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. +0.3 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. +0.3 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. +0.1 +0.3 +0.6
remove
mRNA_909
plot
remove
mRNA_910
plot
remove
mRNA_911
remove
mRNA_912
plot
remove
mRNA_913
plot