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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9278 and 9279 are separated by 331 nucleotides
9279 and 9280 are separated by 349 nucleotides
9280 and 9281 are separated by 12 nucleotides
9281 and 9282 are separated by 415 nucleotides
mRNA_910: 9278 - K00794 ribH, RIB4 6,7-dimethyl-8-ribityllumazine synthase, at 2,176,835 to 2,177,637
9278
mRNA_911: 9279 - KOG1773 Stress responsive protein, at 2,177,969 to 2,178,702
9279
mRNA_912: 9280 - Hypothetical Protein, at 2,179,052 to 2,180,263
9280
mRNA_913: 9281 - Hypothetical Protein, at 2,180,276 to 2,181,730
9281
mRNA_914: 9282 - K10903 HUS1 HUS1 checkpoint protein, at 2,182,146 to 2,183,559
9282
Group
Condition
mRNA
_910
mRNA
_911
mRNA
_912
mRNA
_913
mRNA
_914
9278
9279
9280
9281
9282
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.4
-0.1
-1.3
-2.3
auxotrophy
YNB Glucose
N.D.
-0.2
+0.2
-1.9
-0.9
auxotrophy
Dropout Complete
N.D.
+0.0
-0.2
-1.1
-1.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.6
+0.2
-0.4
-1.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.0
+0.2
-1.7
-0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.2
+0.2
-1.1
-0.8
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
-0.1
-1.7
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.0
+0.5
-0.5
-1.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.3
-0.2
+0.2
-1.0
growth on ypd
YPD
N.D.
-0.1
+0.4
-0.3
-1.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.0
-0.3
+0.0
-0.9
growth on oleic acid
YNB Glucose
N.D.
+0.4
+0.1
-1.0
-0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
-0.2
-0.8
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.4
+0.0
+0.5
-0.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.3
+0.3
+0.2
-1.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.6
+0.9
-0.6
-1.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.3
+0.3
+0.2
-0.9
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.3
-0.1
-0.7
+0.6
growth on oleic acid
YNB Oleic Acid
N.D.
+0.5
-0.1
-0.2
+0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.0
+0.2
-0.3
+0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.1
+0.3
+0.6
+0.0
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