Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9287 and 9288 are separated by 647 nucleotides
9288 and 9289 are separated by 137 nucleotides
9289 and 9290 are separated by 326 nucleotides
9290 and 9291 are separated by 456 nucleotides
mRNA_919: 9287 - KOG1397 Ca2+/H+ antiporter VCX1 and related proteins, at 2,192,873 to 2,195,509
9287
mRNA_920: 9288 - BLAST cytochrome c heme-binding site [Moesziomyces anta..., at 2,196,157 to 2,196,942
9288
mRNA_921: 9289 - KOG1485 Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily), at 2,197,080 to 2,198,559
9289
mRNA_922: 9290 - K06110 EXOC3, SEC6 exocyst complex component 3, at 2,198,886 to 2,201,562
9290
mRNA_923: 9291 - K03446 emrB MFS transporter, DHA2 family, multidrug resistance protein, at 2,202,019 to 2,204,450
9291
Group
Condition
mRNA
_919
mRNA
_920
mRNA
_921
mRNA
_922
mRNA
_923
9287
9288
9289
9290
9291
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.3
-1.6
N.D.
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.6
-0.5
N.D.
-0.0
growth on oleic acid
YNB Glucose
-0.1
-0.4
+0.2
N.D.
+0.0
growth on ricinoleic acid
YNB Glucose
-0.0
-0.4
+0.1
N.D.
-0.1
growth on oleic acid
YNB Oleic Acid
-0.2
-0.4
+0.5
N.D.
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.5
+0.2
N.D.
+0.4
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.1
-0.0
N.D.
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.1
+0.2
N.D.
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.5
+0.7
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.1
+0.1
N.D.
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.0
+0.4
N.D.
-0.0
auxotrophy
Dropout Complete
-0.1
+0.3
+0.2
N.D.
+0.1
auxotrophy
YNB Glucose
+0.0
-0.0
+0.3
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.1
+0.5
N.D.
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.3
+1.0
N.D.
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.1
+0.8
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.5
+0.3
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.1
+1.1
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.1
+1.0
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.5
+0.7
N.D.
+0.1
growth on ypd
YPD
+0.2
+0.2
+1.1
N.D.
+0.0
remove
mRNA_919
plot
remove
mRNA_920
plot
remove
mRNA_921
remove
mRNA_922
plot
remove
mRNA_923
plot