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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9290 and 9291 are separated by 456 nucleotides
9291 and 9292 are separated by 317 nucleotides
9292 and 9293 are separated by 282 nucleotides
9293 and 9294 are separated by 1002 nucleotides
mRNA_922: 9290 - K06110 EXOC3, SEC6 exocyst complex component 3, at 2,198,886 to 2,201,562
9290
mRNA_923: 9291 - K03446 emrB MFS transporter, DHA2 family, multidrug resistance protein, at 2,202,019 to 2,204,450
9291
mRNA_924: 9292 - KOG0798 Uncharacterized conserved protein, at 2,204,768 to 2,206,248
9292
mRNA_925: 9293 - K10704 UBE2V ubiquitin-conjugating enzyme E2 variant, at 2,206,531 to 2,207,210
9293
mRNA_926: 9294 - K20647 ARHGAP32 Rho GTPase-activating protein 32, at 2,208,213 to 2,211,495
9294
Group
Condition
mRNA
_922
mRNA
_923
mRNA
_924
mRNA
_925
mRNA
_926
9290
9291
9292
9293
9294
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.0
-0.0
-3.6
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.1
-0.5
-0.6
-0.5
growth on oleic acid
YNB Oleic Acid
N.D.
-0.1
+0.0
-1.2
-0.3
auxotrophy
Dropout Complete
N.D.
+0.1
-0.2
-0.9
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.1
-0.3
-0.4
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.1
+0.4
-1.5
+0.0
growth on oleic acid
YNB Glucose
N.D.
+0.0
-0.0
-1.0
+0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
+0.1
-0.9
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
-0.1
-0.6
-0.2
auxotrophy
YNB Glucose
N.D.
+0.2
+0.1
-0.8
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.0
+0.5
-1.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.1
+0.1
-0.9
+0.0
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.2
+0.0
-0.5
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.1
+0.2
-0.6
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.4
-0.5
-0.4
-0.0
growth on ypd
YPD
N.D.
+0.0
-0.3
-0.2
+0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
+0.3
-0.2
-0.0
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
+0.0
+0.3
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.0
+0.0
+0.3
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.2
+0.1
+0.5
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.1
+0.4
+1.0
-0.1
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