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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9291 and 9292 are separated by 317 nucleotides
9292 and 9293 are separated by 282 nucleotides
9293 and 9294 are separated by 1002 nucleotides
9294 and 9295 are separated by 270 nucleotides
mRNA_923: 9291 - K03446 emrB MFS transporter, DHA2 family, multidrug resistance protein, at 2,202,019 to 2,204,450
9291
mRNA_924: 9292 - KOG0798 Uncharacterized conserved protein, at 2,204,768 to 2,206,248
9292
mRNA_925: 9293 - K10704 UBE2V ubiquitin-conjugating enzyme E2 variant, at 2,206,531 to 2,207,210
9293
mRNA_926: 9294 - K20647 ARHGAP32 Rho GTPase-activating protein 32, at 2,208,213 to 2,211,495
9294
mRNA_927: 9295 - KOG1611 Predicted short chain-type dehydrogenase, at 2,211,766 to 2,213,032
9295
Group
Condition
mRNA
_923
mRNA
_924
mRNA
_925
mRNA
_926
mRNA
_927
9291
9292
9293
9294
9295
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.0
-3.6
-0.1
+0.5
growth on ricinoleic acid
YNB Glucose
-0.1
-0.5
-0.6
-0.5
-0.4
auxotrophy
Dropout Complete
+0.1
-0.2
-0.9
-0.4
-0.3
growth on oleic acid
YNB Oleic Acid
-0.1
+0.0
-1.2
-0.3
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.3
-0.4
-0.4
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.4
-1.5
+0.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.1
-0.9
-0.3
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.1
-0.6
-0.2
-0.4
growth on oleic acid
YNB Glucose
+0.0
-0.0
-1.0
+0.0
-0.1
auxotrophy
YNB Glucose
+0.2
+0.1
-0.8
-0.4
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.0
-0.5
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.5
-1.1
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.2
-0.6
-0.3
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
-0.5
-0.4
-0.0
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.1
-0.9
+0.0
+0.2
growth on ypd
YPD
+0.0
-0.3
-0.2
+0.0
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.0
+0.3
-0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.3
-0.2
-0.0
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.0
+0.3
+0.0
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
+0.1
+0.5
+0.0
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.4
+1.0
-0.1
-0.3
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