Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9293 and 9294 are separated by 1002 nucleotides9294 and 9295 are separated by 270 nucleotides9295 and 9296 are separated by 268 nucleotides9296 and 9297 are separated by 432 nucleotides mRNA_925: 9293 - K10704 UBE2V ubiquitin-conjugating enzyme E2 variant, at 2,206,531 to 2,207,210 9293 mRNA_926: 9294 - K20647 ARHGAP32 Rho GTPase-activating protein 32, at 2,208,213 to 2,211,495 9294 mRNA_927: 9295 - KOG1611 Predicted short chain-type dehydrogenase, at 2,211,766 to 2,213,032 9295 mRNA_928: 9296 - Hypothetical Protein, at 2,213,301 to 2,214,624 9296 mRNA_929: 9297 - HMMPfam-Protein of unknown function (DUF2419)-PF10343, at 2,215,057 to 2,216,039 9297
Group Condition mRNA_925 mRNA_926 mRNA_927 mRNA_928 mRNA_929
9293 9294 9295 9296 9297
facs on lipid accumulation Sorted Low BODIPY Gate -3.6 -0.1 +0.5 +0.4 +0.2
growth on ricinoleic acid YNB Glucose -0.6 -0.5 -0.4 -0.9 -0.2
growth on oleic acid YNB Oleic Acid -1.2 -0.3 -0.2 -0.8 +0.0
auxotrophy Dropout Complete -0.9 -0.4 -0.3 -0.6 -0.0
auxotrophy YNB Glucose -0.8 -0.4 -0.3 -0.7 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.5 +0.0 -0.2 -0.5 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.9 -0.3 -0.3 -0.6 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -0.2 -0.4 -1.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.3 -0.1 -0.8 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.1 -0.1 -0.1 -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.3 -0.2 -0.6 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.4 -0.3 -0.4 -0.1
growth on oleic acid YNB Glucose -1.0 +0.0 -0.1 -0.5 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.9 +0.0 +0.2 -0.4 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.2 -0.1 -0.9 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.0 -0.1 -0.3 -1.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.0 +0.0 -0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.0 +0.2 -0.1 +0.1
growth on ypd YPD -0.2 +0.0 +0.2 +0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.0 +0.1 -0.0 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 +0.0 +0.3 +0.3 -0.1
remove
mRNA_925
plot
remove
mRNA_926
plot
remove
mRNA_927
remove
mRNA_928
plot
remove
mRNA_929
plot