Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9300 and 9301 are separated by 1465 nucleotides9301 and 9302 are separated by 239 nucleotides9302 and 9303 are separated by 239 nucleotides9303 and 9304 are separated by 444 nucleotides mRNA_932: 9300 - K01803 TPI, tpiA triosephosphate isomerase (TIM), at 6,530 to 8,158 9300 mRNA_933: 9301 - HMMPfam-NDT80 / PhoG like DNA-binding family-PF05224,ProSiteProfiles-NDT80 DNA-binding domain profile.-PS51517,SUPERFAMILY--SSF49417, at 9,624 to 11,846 9301 mRNA_934: 9302 - K18726 FAF2, UBXD8 FAS-associated factor 2, at 12,086 to 14,306 9302 mRNA_935: 9303 - HMMPfam-Glycosyl Hydrolase Family 88-PF07470,SUPERFAMILY--SSF48208, at 14,546 to 16,225 9303 mRNA_936: 9304 - K10365 CAPZB capping protein (actin filament) muscle Z-line, beta, at 16,670 to 18,291 9304
Group Condition mRNA_932 mRNA_933 mRNA_934 mRNA_935 mRNA_936
9300 9301 9302 9303 9304
auxotrophy YNB Glucose 75mM Methionine N.D. -0.4 -0.2 -0.3 -0.3
auxotrophy Dropout Complete N.D. +0.0 -0.4 -0.1 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.8 +0.2 +0.1 -0.4
auxotrophy YNB Glucose N.D. -0.3 -0.1 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 -0.3 -0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.5 -0.9 +0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 +0.2 -0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.3 +0.2 -0.0 -0.0
growth on oleic acid YNB Oleic Acid N.D. -0.3 -0.2 +0.1 +0.3
growth on ricinoleic acid YNB Glucose N.D. -0.2 -0.4 +0.1 +0.5
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.4 +0.1 -0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 -0.4 +0.2 +0.5
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 +0.4 -0.1 +0.1
growth on ypd YPD N.D. +0.8 -1.1 +0.2 +0.4
growth on oleic acid YNB Glucose N.D. +0.0 +0.2 +0.0 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.0 -0.1 +0.2 +0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.5 -0.3 +0.2 +0.6
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.2 +1.0 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.3 -0.1 +0.3 +0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.6 -0.2 +0.3 +1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.6 -0.0 +0.1 +1.2
remove
mRNA_932
plot
remove
mRNA_933
plot
remove
mRNA_934
remove
mRNA_935
plot
remove
mRNA_936
plot