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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9303 and 9304 are separated by 444 nucleotides
9304 and 9305 are separated by 1049 nucleotides
9305 and 9306 are separated by 456 nucleotides
9306 and 9307 are separated by 1048 nucleotides
mRNA_935: 9303 - HMMPfam-Glycosyl Hydrolase Family 88-PF07470,SUPERFAMILY--SSF48208, at 14,546 to 16,225
9303
mRNA_936: 9304 - K10365 CAPZB capping protein (actin filament) muscle Z-line, beta, at 16,670 to 18,291
9304
mRNA_937: 9305 - KOG1721 FOG Zn-finger, at 19,341 to 20,725
9305
mRNA_938: 9306 - Hypothetical Protein, at 21,182 to 22,697
9306
mRNA_939: 9307 - Hypothetical Protein, at 23,746 to 25,185
9307
Group
Condition
mRNA
_935
mRNA
_936
mRNA
_937
mRNA
_938
mRNA
_939
9303
9304
9305
9306
9307
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.0
-0.8
-0.2
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-0.4
+0.1
-0.1
-0.4
auxotrophy
YNB Glucose
-0.1
-0.3
-0.2
-0.2
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.3
-0.2
-0.0
+0.1
auxotrophy
Dropout Complete
-0.1
-0.5
+0.1
-0.1
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.3
-0.1
-0.0
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.2
-0.1
-0.1
+0.1
growth on ricinoleic acid
YNB Glucose
+0.1
+0.5
-0.5
-0.2
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.2
-0.4
-0.0
+0.5
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.0
+0.2
+0.1
-0.0
growth on oleic acid
YNB Oleic Acid
+0.1
+0.3
+0.1
-0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
-0.1
+0.0
+0.2
growth on oleic acid
YNB Glucose
+0.0
+0.3
+0.1
-0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.0
+0.2
+0.0
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+0.5
+0.1
+0.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.6
+0.4
-0.2
+0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+1.2
-0.2
-0.1
+0.6
growth on ypd
YPD
+0.2
+0.4
+0.2
+0.4
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.9
+0.3
+0.4
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.9
+0.4
-0.1
+0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+1.0
+1.5
+0.2
+0.5
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