Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9309 and 9310 are separated by 98 nucleotides9310 and 9311 are separated by 187 nucleotides9311 and 9312 are separated by 705 nucleotides9312 and 9313 are separated by 4322 nucleotides mRNA_941: 9309 - HMMPfam-Calcineurin-like phosphoesterase-PF00149,SUPERFAMILY--SSF56300, at 27,276 to 29,421 9309 mRNA_942: 9310 - KOG1743 Ferric reductase-like proteins, at 29,520 to 30,621 9310 mRNA_943: 9311 - K05759 PFN profilin, at 30,809 to 31,667 9311 mRNA_944: 9312 - Hypothetical Protein, at 32,373 to 33,071 9312 mRNA_945: 9313 - Hypothetical Protein, at 37,394 to 37,567 9313
Group Condition mRNA_941 mRNA_942 mRNA_943 mRNA_944 mRNA_945
9309 9310 9311 9312 9313
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 N.D. -0.7 N.D.
growth on ypd YPD -0.2 +0.2 N.D. -0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.2 N.D. +0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.4 N.D. +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.4 N.D. +0.2 N.D.
growth on ricinoleic acid YNB Glucose -0.4 +0.4 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.4 N.D. +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.4 N.D. +0.1 N.D.
auxotrophy Dropout Complete -0.4 +1.1 N.D. -0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.7 N.D. +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.1 N.D. +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.5 N.D. +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.7 N.D. -0.2 N.D.
auxotrophy YNB Glucose -0.3 +0.8 N.D. +0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.4 +0.6 N.D. +0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +1.3 N.D. -0.1 N.D.
growth on oleic acid YNB Glucose +0.1 +0.4 N.D. +0.7 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 +0.6 N.D. +0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.9 N.D. +0.4 N.D.
growth on oleic acid YNB Oleic Acid +0.1 +0.9 N.D. +0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +1.8 N.D. -0.4 N.D.
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